Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC000374.1-201ENST00000434698 1745 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.43□□□□□ -1.7
SDCBPO00560 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SDCBPO00560 AL672167.1-204ENST00000641875 3017 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 AP005432.1-201ENST00000580891 3485 ntBASIC4.42□□□□□ -1.7
SDCBPO00560 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SDCBPO00560 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SDCBPO00560 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SDCBPO00560 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SDCBPO00560 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.42□□□□□ -1.7
SDCBPO00560 MIR589-201ENST00000385238 99 ntBASIC4.42□□□□□ -1.7
SDCBPO00560 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.42□□□□□ -1.7
SDCBPO00560 AL161636.2-201ENST00000445179 927 ntBASIC4.42□□□□□ -1.7
SDCBPO00560 AC073909.1-201ENST00000447112 999 ntBASIC4.42□□□□□ -1.7
SDCBPO00560 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.42□□□□□ -1.7
SDCBPO00560 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SDCBPO00560 RPS4XP12-201ENST00000461747 709 ntBASIC4.42□□□□□ -1.7
SDCBPO00560 AC090638.1-201ENST00000498296 909 ntBASIC4.42□□□□□ -1.7
SDCBPO00560 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.42□□□□□ -1.7
SDCBPO00560 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.42□□□□□ -1.7
SDCBPO00560 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.42□□□□□ -1.7
SDCBPO00560 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.42□□□□□ -1.7
SDCBPO00560 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.42□□□□□ -1.7
SDCBPO00560 AC037198.3-201ENST00000616754 526 ntBASIC4.42□□□□□ -1.7
SDCBPO00560 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SDCBPO00560 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SDCBPO00560 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.42□□□□□ -1.7
SDCBPO00560 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SDCBPO00560 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.42□□□□□ -1.7
SDCBPO00560 AC025574.1-201ENST00000554784 1653 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDCBPO00560 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SDCBPO00560 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.41□□□□□ -1.7
SDCBPO00560 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SDCBPO00560 AL031985.1-201ENST00000392713 418 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AL133388.1-201ENST00000404509 287 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 RNA5SP178-201ENST00000410380 128 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 NPM1P40-201ENST00000412758 733 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.41□□□□□ -1.7
SDCBPO00560 VN1R3-201ENST00000418822 919 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.41□□□□□ -1.7
SDCBPO00560 RPS29P14-201ENST00000431518 171 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 GAPDHP58-201ENST00000438477 1006 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AL390119.1-201ENST00000440329 312 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 RPS11P7-201ENST00000442125 465 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.41□□□□□ -1.7
SDCBPO00560 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SDCBPO00560 AL157385.1-201ENST00000446973 268 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.41□□□□□ -1.7
SDCBPO00560 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 OR52E7P-201ENST00000452394 933 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.41□□□□□ -1.7
SDCBPO00560 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SDCBPO00560 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDCBPO00560 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.41□□□□□ -1.7
SDCBPO00560 AC022404.1-201ENST00000555320 273 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.41□□□□□ -1.7
SDCBPO00560 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.41□□□□□ -1.7
SDCBPO00560 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 AC005252.1-201ENST00000604518 1063 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AL162431.4-201ENST00000604674 411 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 AC015982.1-201ENST00000608113 465 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AL357153.4-201ENST00000620487 1016 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AP000648.2-201ENST00000624182 404 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 AC103703.1-201ENST00000634783 663 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 AC073869.10-201ENST00000642016 354 ntBASIC4.41□□□□□ -1.7
SDCBPO00560 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDCBPO00560 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDCBPO00560 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SDCBPO00560 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.41□□□□□ -1.7
SDCBPO00560 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.41□□□□□ -1.7
SDCBPO00560 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDCBPO00560 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDCBPO00560 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDCBPO00560 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.4□□□□□ -1.7
SDCBPO00560 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.4□□□□□ -1.7
SDCBPO00560 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.4□□□□□ -1.7
SDCBPO00560 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SDCBPO00560 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.4□□□□□ -1.7
SDCBPO00560 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SDCBPO00560 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.4□□□□□ -1.7
SDCBPO00560 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.4□□□□□ -1.71
SDCBPO00560 MIR105-1-201ENST00000385222 81 ntBASIC4.4□□□□□ -1.71
SDCBPO00560 NPM1P38-201ENST00000403835 865 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms