Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC104333.2-201ENST00000422630 192 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AC009238.2-201ENST00000431026 355 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 RPS26P41-201ENST00000450370 284 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AC091180.1-201ENST00000462104 372 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AL133445.1-201ENST00000467051 452 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 PPIAP19-201ENST00000486414 492 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 GTF2IP11-201ENST00000526931 420 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AC126177.5-201ENST00000549599 178 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AP001962.1-201ENST00000624114 559 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 SMG1P4-204ENST00000523028 4131 ntBASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.65□□□□□ -1.66
TRAV27A0A087WT01 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 CDY17P-201ENST00000414121 1282 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC117434.1-201ENST00000419971 836 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 EI24P4-201ENST00000423683 1078 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 RPS27AP2-201ENST00000457576 465 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 RPL7P6-201ENST00000480903 738 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 RN7SL184P-201ENST00000488308 297 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC005412.2-201ENST00000492004 341 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 MORF4L2P1-201ENST00000503761 858 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 MTATP6P1-201ENST00000514057 681 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 MIR3614-201ENST00000581261 86 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC018695.5-201ENST00000605872 315 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AP005131.7-201ENST00000610087 611 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC109309.2-201ENST00000612597 332 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AL353684.1-201ENST00000622677 1120 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AP000648.2-201ENST00000624182 404 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC103703.1-201ENST00000634783 663 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 SAMMSON-209ENST00000641222 1100 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AC073869.10-201ENST00000642016 354 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 AL731532.2-201ENST00000623542 1953 ntBASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAV27A0A087WT01 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC003985.2-201ENST00000562268 1669 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC017079.1-201ENST00000333650 415 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 RNA5SP178-201ENST00000410380 128 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 REREP1Y-201ENST00000422655 198 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 REREP2Y-201ENST00000439103 200 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms