Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTCH2Q9Y6C5 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTCH2Q9Y6C5 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.89□□□□□ -1.31
PTCH2Q9Y6C5 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PTCH2Q9Y6C5 AL359195.2-201ENST00000623657 4412 ntBASIC6.89□□□□□ -1.31
PTCH2Q9Y6C5 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PTCH2Q9Y6C5 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
PTCH2Q9Y6C5 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PTCH2Q9Y6C5 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL136531.3-201ENST00000624378 3658 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL589993.1-201ENST00000407450 2524 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 ZNF733P-202ENST00000444809 1573 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC006213.6-201ENST00000623722 4179 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC010624.4-201ENST00000597606 1351 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 RN7SKP128-201ENST00000364270 303 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 SNORA43.1-201ENST00000364863 140 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL023284.3-201ENST00000407767 334 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 RN7SKP125-201ENST00000410481 302 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 OR6E1P-201ENST00000414424 923 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL139415.1-201ENST00000424862 352 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC092017.2-201ENST00000427600 362 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 EEF1B2P5-201ENST00000444820 548 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 MRPL35P2-201ENST00000448009 511 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL451063.1-201ENST00000450164 1133 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 RPL7P32-201ENST00000457119 744 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 RN7SL808P-201ENST00000496066 299 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC008837.1-201ENST00000511513 412 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 OR8I1P-201ENST00000529291 931 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AP000662.1-201ENST00000530952 487 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 MTND3P13-201ENST00000574391 343 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL445222.1-201ENST00000607259 628 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 RPSAP73-201ENST00000614820 330 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL121890.3-201ENST00000618494 516 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC241377.1-201ENST00000619797 406 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AL132640.3-201ENST00000630473 177 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC087565.3-203ENST00000641018 837 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC092821.3-202ENST00000641304 2767 ntBASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTCH2Q9Y6C5 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 CUBNP3-201ENST00000457461 1784 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 ANKRD36P1-201ENST00000344424 659 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 RNU4-68P-201ENST00000364314 141 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 RNU6-1263P-201ENST00000384601 106 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 MIR513B-201ENST00000385136 84 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 Y_RNA.578-201ENST00000390903 88 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 AC119751.3-201ENST00000399720 670 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 AL133270.1-201ENST00000402635 279 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 AL021331.1-201ENST00000402817 582 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 RPS24P7-201ENST00000416921 246 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 TNPO1P1-201ENST00000423641 1138 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 RPS4XP16-201ENST00000427198 791 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 FMO7P-201ENST00000436045 768 ntBASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.87□□□□□ -1.31
PTCH2Q9Y6C5 OR13K1P-201ENST00000444577 975 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms