Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AC117525.1-201ENST00000515228 503 ntBASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AC015720.2-201ENST00000567709 334 ntBASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AC019322.1-201ENST00000571869 389 ntBASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AP000894.4-201ENST00000610185 483 ntBASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AC022467.1-201ENST00000614738 749 ntBASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ATG4BQ9Y4P1 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AL353796.1-201ENST00000561542 3241 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 RCC2P2-201ENST00000422174 918 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 MTND2P40-201ENST00000436718 841 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 MED28P3-201ENST00000444288 531 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 RANP1-206ENST00000455094 651 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 MTND6P2-201ENST00000512226 524 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 ATP5LP3-201ENST00000514223 304 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 RN7SKP99-201ENST00000517028 307 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC078878.1-201ENST00000539832 958 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 DUX4L52-201ENST00000549363 777 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 OR11H3P-201ENST00000554547 982 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC007342.5-201ENST00000571340 2142 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC135068.5-201ENST00000624197 983 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 AC100757.1-201ENST00000616872 1835 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 TCP11X1-202ENST00000622971 1372 ntBASIC5.16□□□□□ -1.58
ATG4BQ9Y4P1 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ATG4BQ9Y4P1 AC003973.3-201ENST00000624863 2822 ntBASIC5.15□□□□□ -1.58
ATG4BQ9Y4P1 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.15□□□□□ -1.58
ATG4BQ9Y4P1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
ATG4BQ9Y4P1 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
ATG4BQ9Y4P1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ATG4BQ9Y4P1 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 RNA5SP234-201ENST00000363916 119 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AL353625.1-202ENST00000366273 571 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 Z93019.1-201ENST00000416450 973 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AC009784.1-201ENST00000426484 460 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 RPL35AP19-201ENST00000469425 329 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AC090638.1-201ENST00000498296 909 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 AC109464.1-201ENST00000511091 819 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 RN7SKP34-201ENST00000516142 244 ntBASIC5.15□□□□□ -1.59
ATG4BQ9Y4P1 RNU6-551P-201ENST00000516661 103 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms