Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC012676.3-201ENST00000614983 479 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC091059.2-201ENST00000623355 614 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AL596275.2-207ENST00000641188 675 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AL596275.2-204ENST00000641628 552 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AL596275.2-206ENST00000641957 626 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AL731532.2-201ENST00000623542 1953 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 AC027228.2-201ENST00000567141 2154 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 OR10AB1P-202ENST00000641219 1686 ntBASIC4.54□□□□□ -1.68
KCNIP3Q9Y2W7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AK4P4-201ENST00000419465 646 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC007161.1-204ENST00000423039 460 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 RAB28P3-201ENST00000448325 597 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AL356390.1-201ENST00000455684 397 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC022336.1-201ENST00000475510 337 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC091917.2-201ENST00000505002 744 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC093325.1-201ENST00000508378 326 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 BTG4P1-201ENST00000510421 183 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 IMPA1P1-201ENST00000510718 842 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 HMGN1P17-201ENST00000513734 295 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 SCARNA18.1-201ENST00000516330 83 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC027369.5-201ENST00000533838 755 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC005000.1-201ENST00000536192 288 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AL358913.1-201ENST00000554342 121 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AL356801.1-201ENST00000559320 294 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 SNORD39.2-201ENST00000579995 76 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AL049829.3-202ENST00000604278 711 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 MIR6809-201ENST00000612189 116 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC015922.4-201ENST00000612568 690 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC109583.2-201ENST00000617367 129 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AL357140.4-201ENST00000636827 412 ntBASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KCNIP3Q9Y2W7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 MIR365B-201ENST00000362317 111 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 RN7SKP153-201ENST00000365026 316 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 RNA5SP30-201ENST00000365552 115 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 UBBP2-201ENST00000376781 231 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 MIR1271-201ENST00000408537 86 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 AC007738.1-201ENST00000413892 348 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 MRPL53P1-201ENST00000414323 319 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 DSTNP5-201ENST00000427921 523 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 AC007383.1-201ENST00000445875 636 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 AC097463.1-201ENST00000447288 481 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 RPL7L1P1-201ENST00000448259 785 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 AC009120.1-201ENST00000493458 473 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 RN7SL362P-201ENST00000494228 267 ntBASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KCNIP3Q9Y2W7 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms