Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SMG1P7-201ENST00000565246 2704 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 AC007342.5-201ENST00000571340 2142 ntBASIC8.03□□□□□ -1.12
USP35Q9P2H5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
USP35Q9P2H5 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USP35Q9P2H5 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USP35Q9P2H5 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
USP35Q9P2H5 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.03□□□□□ -1.12
USP35Q9P2H5 AC093671.1-201ENST00000624981 2929 ntBASIC8.02□□□□□ -1.12
USP35Q9P2H5 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
USP35Q9P2H5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.12
USP35Q9P2H5 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USP35Q9P2H5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
USP35Q9P2H5 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 RPL35AP24-201ENST00000413846 330 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 AL158050.1-201ENST00000416077 457 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 BMS1P17-202ENST00000416720 316 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 LRRC37A14P-201ENST00000452297 462 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 SETP6-201ENST00000479329 568 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 AC006499.3-201ENST00000506077 748 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 IGLV3-30-201ENST00000524362 298 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 C1DP5-201ENST00000525775 383 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 AC104072.1-201ENST00000568817 668 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 AC024589.2-201ENST00000605642 1294 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 AC116651.1-201ENST00000609724 556 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 AL356274.1-201ENST00000617064 410 ntBASIC8.02□□□□□ -1.13
USP35Q9P2H5 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 METTL8-218ENST00000638989 876 ntTSL 5 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 METTL8-219ENST00000640734 726 ntTSL 2 BASIC8.02□□□□□ -1.13
USP35Q9P2H5 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USP35Q9P2H5 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USP35Q9P2H5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USP35Q9P2H5 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USP35Q9P2H5 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USP35Q9P2H5 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USP35Q9P2H5 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USP35Q9P2H5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 MTND5P11-201ENST00000511037 1812 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USP35Q9P2H5 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USP35Q9P2H5 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
USP35Q9P2H5 SELENOWP1-201ENST00000322792 252 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USP35Q9P2H5 RNA5SP478-201ENST00000364657 115 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
USP35Q9P2H5 RNU4-27P-201ENST00000410889 139 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 HMGB3P24-201ENST00000433260 622 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 HSPE1P22-201ENST00000456856 327 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 RN7SL72P-201ENST00000460697 269 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 RPS23P6-201ENST00000466136 431 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 AC021205.1-201ENST00000468797 348 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 RN7SL727P-201ENST00000482164 296 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 AC231760.1-201ENST00000498002 260 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 NENFP3-201ENST00000503735 313 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 AC092593.2-201ENST00000513866 913 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 RNU6-334P-201ENST00000517072 102 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 SOX5P1-201ENST00000524155 1127 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 AC068339.2-201ENST00000534395 618 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 RNU4ATAC-201ENST00000580972 127 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 IMMP1LP3-201ENST00000604197 224 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 AC141002.1-201ENST00000607025 279 ntBASIC8.01□□□□□ -1.13
USP35Q9P2H5 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
USP35Q9P2H5 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
USP35Q9P2H5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
USP35Q9P2H5 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC8□□□□□ -1.13
USP35Q9P2H5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8□□□□□ -1.13
USP35Q9P2H5 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USP35Q9P2H5 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8□□□□□ -1.13
USP35Q9P2H5 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms