Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 RPS26P38-201ENST00000414476 348 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 LINC02210-201ENST00000444561 288 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AC104971.1-201ENST00000495117 578 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AC007497.1-201ENST00000610421 561 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AL445189.1-201ENST00000405722 338 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 RN7SL441P-201ENST00000492388 296 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 RPSAP51-201ENST00000497462 645 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AC106806.2-201ENST00000509365 500 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AC093840.1-201ENST00000511599 336 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.24□□□□□ -1.57
CHD7Q9P2D1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.24□□□□□ -1.57
CHD7Q9P2D1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 RN7SKP145-201ENST00000363291 303 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 RNA5SP397-201ENST00000391323 118 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 SNORA11F-201ENST00000408237 128 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 AP002812.1-201ENST00000495378 474 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 AP000619.2-201ENST00000546014 969 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 AC006133.1-201ENST00000617106 264 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 RN7SKP280-201ENST00000364196 304 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 AC096754.1-201ENST00000508904 818 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 SEPT10P1-201ENST00000517342 1162 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 MIR3939-201ENST00000582614 106 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 MIR6853-201ENST00000619642 74 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 ECM1P2-201ENST00000503354 1577 ntBASIC5.23□□□□□ -1.57
CHD7Q9P2D1 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHD7Q9P2D1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 OR4K17-201ENST00000315543 1032 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SNORA2.3-201ENST00000383920 135 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 RPL36AP36-201ENST00000418616 301 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 FABP7P1-201ENST00000424004 391 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SLC25A18P1-201ENST00000449385 454 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AC098976.1-201ENST00000513014 541 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 RNU1-64P-201ENST00000365443 163 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AL691482.1-201ENST00000453255 87 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AC023424.1-201ENST00000496058 459 ntBASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.22□□□□□ -1.57
CHD7Q9P2D1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms