Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AL627224.1-201ENST00000448334 444 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AL513343.1-201ENST00000451818 792 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 RANP1-206ENST00000455094 651 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AC015864.1-201ENST00000496512 544 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 SCARNA20.4-201ENST00000516969 131 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 TMEM97P2-201ENST00000517841 403 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 OR8G3P-201ENST00000533406 921 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 MIR4675-201ENST00000577898 77 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AC104695.2-201ENST00000605056 775 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AC006840.1-201ENST00000623069 542 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 AC140134.1-201ENST00000511830 3544 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 KARSP1-201ENST00000451871 1752 ntBASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
BLOC1S4Q9NUP1 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 RPS26P13-201ENST00000419030 330 ntBASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 RPL23AP4-201ENST00000427757 463 ntBASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 TAAR4P-201ENST00000454843 1039 ntBASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AC015802.5-201ENST00000607478 399 ntBASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AL353796.1-201ENST00000561542 3241 ntBASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BLOC1S4Q9NUP1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 RBPJP2-201ENST00000618187 1444 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 RNU4-39P-201ENST00000362455 127 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 RNU4-2-201ENST00000365668 141 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 SNORA70.6-201ENST00000383934 134 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 SNORD56.6-201ENST00000384569 71 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 SNORA17A-201ENST00000391185 133 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 DBIP1-201ENST00000401435 260 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 RPL7P58-201ENST00000402913 758 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 RPL5P19-201ENST00000404228 893 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 CR848007.2-201ENST00000424918 787 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 AC093716.1-201ENST00000435923 377 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 MTND2P3-201ENST00000452458 470 ntBASIC6.09□□□□□ -1.43
BLOC1S4Q9NUP1 CALM1P2-201ENST00000452941 448 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms