Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 AC116651.1-201ENST00000609724 556 ntBASIC6.33□□□□□ -1.4
SALL1Q9NSC2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 ZNF402P-201ENST00000404435 3100 ntBASIC6.33□□□□□ -1.4
SALL1Q9NSC2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 AC079298.1-201ENST00000625026 1619 ntBASIC6.33□□□□□ -1.4
SALL1Q9NSC2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SALL1Q9NSC2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 CHMP1B2P-201ENST00000399581 597 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 RN7SKP216-201ENST00000411050 312 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC017019.1-201ENST00000426129 261 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 HSPD1P12-201ENST00000429127 1069 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 RBMY2QP-201ENST00000429799 1147 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC092647.3-201ENST00000443044 633 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AP000797.2-201ENST00000475768 606 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 IMPA1P1-201ENST00000510718 842 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC022360.1-201ENST00000521058 340 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AC011840.5-201ENST00000582125 771 ntBASIC6.32□□□□□ -1.4
SALL1Q9NSC2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SALL1Q9NSC2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 MIR133A2-201ENST00000347538 102 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AL136231.1-201ENST00000429407 730 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 RPL5P25-201ENST00000441148 775 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 RN7SL860P-201ENST00000473738 223 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 RPL37AP8-201ENST00000494116 276 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AP001922.4-201ENST00000526967 290 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 SETP3-201ENST00000581726 813 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AP002884.5-201ENST00000595053 1132 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AC093799.2-201ENST00000610062 578 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AC015660.5-201ENST00000623238 564 ntBASIC6.31□□□□□ -1.4
SALL1Q9NSC2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL1Q9NSC2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms