Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PSMA6P3-201ENST00000428242 164 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AL353597.2-202ENST00000434901 373 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC093156.1-201ENST00000440382 670 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 ATP6V1G1P3-201ENST00000442568 280 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AL669970.1-201ENST00000444936 450 ntTSL 2 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC025062.1-201ENST00000465163 644 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 RN7SL496P-201ENST00000470372 290 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 RN7SL316P-201ENST00000483452 272 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC098827.1-201ENST00000514630 667 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 SNORA33.3-201ENST00000516236 136 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC022832.1-201ENST00000530718 645 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 NF1P12-201ENST00000549593 583 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AP005119.1-201ENST00000580956 292 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 snoZ6.4-201ENST00000581669 55 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC005261.5-201ENST00000596280 355 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC007566.2-201ENST00000603642 413 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 Metazoa_SRP.204-201ENST00000611908 247 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 RN7SL428P-201ENST00000613848 247 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 RN7SL331P-201ENST00000618054 247 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AL450226.2-201ENST00000622913 439 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 MTND1P37-201ENST00000636562 264 ntBASIC9.55□□□□□ -0.88
RTN4Q9NQC3 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTN4Q9NQC3 AC107398.3-201ENST00000562284 7000 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AC107027.3-201ENST00000565095 3473 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 SLC2A3P2-201ENST00000331747 1480 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 MTND5P33-201ENST00000571250 1450 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 NUP58P1-201ENST00000502546 1738 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AC114546.3-201ENST00000623582 1734 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AC100810.3-201ENST00000633189 2240 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 Y_RNA.159-201ENST00000363674 87 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 RNY3P3-201ENST00000363816 102 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 Y_RNA.234-201ENST00000364409 97 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 TPM3P6-201ENST00000391998 742 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 RPS4XP8-201ENST00000402039 771 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 RN7SKP110-201ENST00000410146 285 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 RPSAP21-201ENST00000414293 885 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 ELOCP4-201ENST00000420090 333 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 GPR143P-201ENST00000434155 205 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 LINC01803-201ENST00000438659 613 ntTSL 2 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 VN1R38P-201ENST00000450265 887 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 CHIAP1-201ENST00000456220 995 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AC079340.2-202ENST00000504785 448 ntTSL 5 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 NACAP5-201ENST00000509863 636 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 CYCSP22-201ENST00000517555 339 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 RPS20-207ENST00000520627 423 ntTSL 5 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 RAB11AP2-201ENST00000545905 639 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AL392023.1-201ENST00000555655 531 ntTSL 3 BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 MIR3167-201ENST00000579623 85 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 MIR2467-201ENST00000584559 81 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AC007038.2-201ENST00000608095 740 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 HLA-B-258ENST00000640615 240 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms