Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AL078623.1-201ENST00000602702 907 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 SUMO2P14-201ENST00000604488 293 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AL365181.4-201ENST00000609800 547 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AL139418.1-201ENST00000613613 177 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC012676.3-201ENST00000614983 479 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 HTR1DP1-201ENST00000616500 888 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 RMST_5.1-201ENST00000618704 126 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC211486.4-201ENST00000621495 113 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 MIR6813-201ENST00000621638 56 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC009878.1-201ENST00000621819 340 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AP003400.5-201ENST00000624827 617 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 CLUHP10-201ENST00000631979 980 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 OFD1P17-201ENST00000437639 3018 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SEC61A2Q9H9S3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.84□□□□□ -1.48
SEC61A2Q9H9S3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
SEC61A2Q9H9S3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
SEC61A2Q9H9S3 NXF4-202ENST00000416098 1465 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 Y_RNA.6-201ENST00000362350 114 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 MT-TH-201ENST00000387441 69 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 SNORA26.8-201ENST00000391306 124 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 HSPD1P16-201ENST00000402302 394 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 OR2W4P-201ENST00000406496 926 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AL663109.1-201ENST00000411498 844 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 USP9YP33-201ENST00000412220 421 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AL929472.1-201ENST00000417484 429 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 HMGB1P48-201ENST00000446155 598 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC011825.1-201ENST00000484967 388 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC022415.1-202ENST00000486612 523 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 DSTNP2-201ENST00000504533 515 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 OR52H2P-201ENST00000514607 902 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC244502.2-201ENST00000543361 851 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 CCNG2P1-201ENST00000549521 1000 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 MTCO3P24-201ENST00000572729 782 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 RN7SL66P-201ENST00000582099 264 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AL583832.1-201ENST00000603227 784 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AP000403.1-201ENST00000603349 851 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 SNORD96A-201ENST00000606577 79 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC107075.1-201ENST00000613695 314 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AL352984.2-202ENST00000613699 155 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AP001264.1-201ENST00000620602 703 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC022140.2-201ENST00000623500 188 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AL161901.1-201ENST00000624954 3425 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 ZNF833P-201ENST00000424938 1494 ntBASIC5.83□□□□□ -1.48
SEC61A2Q9H9S3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms