Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 RN7SKP103-201ENST00000363848 320 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 HMGB1P20-201ENST00000402555 677 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 SRSF1P1-201ENST00000424058 520 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 EIF2S2P3-201ENST00000428356 999 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 FABP7P2-201ENST00000429946 379 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 AL445928.1-201ENST00000435545 222 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM4Q9C037 AL122020.1-201ENST00000472287 459 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 OR2AO1P-201ENST00000476497 403 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 AC004825.1-201ENST00000555068 586 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM4Q9C037 MFSD8-239ENST00000641590 2479 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 PABPC1P6-201ENST00000445594 1829 ntBASIC5.55□□□□□ -1.52
TRIM4Q9C037 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM4Q9C037 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 ZNF652P1-201ENST00000442420 1309 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM4Q9C037 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC007938.2-201ENST00000604666 2634 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM4Q9C037 SELENOWP1-201ENST00000322792 252 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 RNU4-44P-201ENST00000363050 141 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 RPL11P3-201ENST00000395256 523 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AL133270.1-201ENST00000402635 279 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 MIR1286-201ENST00000408112 78 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 RPS4XP5-201ENST00000419038 768 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC126120.1-201ENST00000431082 470 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC096775.1-201ENST00000437724 448 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC023245.1-201ENST00000468501 517 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC079080.1-201ENST00000479841 822 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC004453.1-201ENST00000487895 408 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC083795.1-201ENST00000491760 320 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC008629.2-201ENST00000503783 483 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC138866.2-201ENST00000508650 584 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AP000648.1-201ENST00000529682 397 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 HAUS8P1-201ENST00000549005 542 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC127024.5-201ENST00000580085 462 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AL031601.1-201ENST00000605702 394 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC100827.5-201ENST00000615883 426 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC008115.4-201ENST00000619780 775 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM4Q9C037 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM4Q9C037 AC027088.4-201ENST00000611559 1947 ntBASIC5.54□□□□□ -1.52
TRIM4Q9C037 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRIM4Q9C037 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM4Q9C037 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM4Q9C037 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM4Q9C037 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM4Q9C037 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM4Q9C037 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM4Q9C037 RNA5SP46-201ENST00000362370 120 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 RN7SKP124-201ENST00000364730 341 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 MIR550A3-201ENST00000390735 95 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 AL133482.1-201ENST00000415988 498 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 TNPO1P1-201ENST00000423641 1138 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 AL359265.1-201ENST00000440296 795 ntBASIC5.53□□□□□ -1.52
TRIM4Q9C037 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM4Q9C037 EEF1B2P5-201ENST00000444820 548 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms