Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC007683.2-201ENST00000624681 714 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 LINC01963-201ENST00000562038 3148 ntBASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
UPF3BQ9BZI7 AC079298.1-201ENST00000625026 1619 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 HSPD1P12-201ENST00000429127 1069 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 CFL1P1-202ENST00000432948 411 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 NOP56P2-201ENST00000447491 769 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 AL672138.1-201ENST00000450604 1015 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 CBX1P2-201ENST00000453841 458 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 SCARNA16.4-201ENST00000516956 187 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 AC027369.5-201ENST00000533838 755 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 HAUS8P1-201ENST00000549005 542 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 AC024940.4-201ENST00000605507 246 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 AC000068.2-201ENST00000608816 460 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 AC073342.3-201ENST00000624211 193 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 AC004158.1-201ENST00000564508 4319 ntBASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UPF3BQ9BZI7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 ADAM5-202ENST00000399789 1942 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 OR9G4-201ENST00000302957 984 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 MIR133B-201ENST00000362210 119 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 AL645927.1-201ENST00000396783 406 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 AL391422.1-201ENST00000402155 436 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 RN7SKP59-201ENST00000410520 314 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 RPL6P21-201ENST00000418672 846 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 PRUNEP1-201ENST00000425846 705 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 AL136231.1-201ENST00000429407 730 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 RPL12P17-201ENST00000432393 498 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 AC012075.1-201ENST00000436549 580 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 OTX2P1-201ENST00000450956 354 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 AC108161.1-201ENST00000461060 402 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 FTH1P2-201ENST00000466086 412 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 COPS8P2-201ENST00000473228 627 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 AC016839.1-201ENST00000578162 867 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 RBM22P1-201ENST00000578589 1214 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 MTCYBP13-201ENST00000578634 1093 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 FRG1EP-201ENST00000634469 770 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 AC002525.1-201ENST00000624392 1622 ntBASIC6.35□□□□□ -1.39
UPF3BQ9BZI7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 RN7SKP124-201ENST00000364730 341 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC124944.2-201ENST00000429866 1242 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC105399.1-202ENST00000447303 205 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 OR52E3P-201ENST00000452083 936 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC007386.1-201ENST00000455212 582 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC090638.1-201ENST00000498296 909 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 HMGB1P44-201ENST00000508597 572 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms