Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 OR13C1P-202ENST00000641378 2919 ntBASIC4.4□□□□□ -1.7
HDHD3Q9BSH5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
HDHD3Q9BSH5 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.4□□□□□ -1.7
HDHD3Q9BSH5 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
HDHD3Q9BSH5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AC005294.1-201ENST00000355509 281 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 RN7SKP187-201ENST00000365536 330 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 MIR105-1-201ENST00000385222 81 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 EEF1B2P8-201ENST00000414101 671 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 VN1R3-201ENST00000418822 919 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 RPS3P2-201ENST00000421346 701 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 GAPDHP58-201ENST00000438477 1006 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AL390119.1-201ENST00000440329 312 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 MTCO3P17-201ENST00000443775 513 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 GAPDHP25-201ENST00000447061 1001 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AC005363.1-201ENST00000530779 351 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 BLZF2P-201ENST00000553776 1130 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AC009852.2-201ENST00000567898 485 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 CU639417.4-201ENST00000623928 207 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AC007683.2-201ENST00000624681 714 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AC073869.10-201ENST00000642016 354 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AC006210.2-201ENST00000367074 1545 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 AC233968.1-201ENST00000611212 1300 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 CASC19-255ENST00000641733 1385 ntBASIC4.4□□□□□ -1.71
HDHD3Q9BSH5 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 RNA5SP234-201ENST00000363916 119 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 U3.32-201ENST00000408116 212 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 CTSL3P-202ENST00000412179 788 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 SLC20A1P1-201ENST00000413906 956 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 BMS1P17-202ENST00000416720 316 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC104333.2-201ENST00000422630 192 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 CYCSP24-201ENST00000445119 316 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 RPL36AP39-201ENST00000445859 318 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 BX842559.2-201ENST00000451418 605 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 DNAJB5P1-201ENST00000454004 806 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 RANP1-206ENST00000455094 651 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC079168.1-201ENST00000458741 345 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC091917.2-201ENST00000505002 744 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 GOLGA5P1-201ENST00000507317 980 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 RNU6-1334P-201ENST00000516032 105 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 TOMM20P1-201ENST00000534518 427 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC010615.3-201ENST00000597319 394 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC008814.1-201ENST00000603797 406 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 BNIP3P35-201ENST00000604530 490 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AC100767.2-201ENST00000604840 693 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 OR51C1P-201ENST00000608504 942 ntBASIC4.39□□□□□ -1.71
HDHD3Q9BSH5 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms