Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL163973.1-201ENST00000484753 577 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 RPL32P9-201ENST00000487963 407 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 MYADML-203ENST00000491596 951 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL449212.1-201ENST00000499853 517 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 GSTO3P-201ENST00000504733 718 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC048344.2-201ENST00000547280 147 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL389895.1-201ENST00000554127 252 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC092718.4-201ENST00000566639 716 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 MYL12BP1-201ENST00000569826 507 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 MIR4680-201ENST00000580906 66 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 RN7SL468P-201ENST00000582256 294 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL008723.3-201ENST00000608926 449 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL592227.1-201ENST00000614748 126 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 RMST_9.1-201ENST00000619945 193 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 Z69720.2-201ENST00000624755 279 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC105074.1-201ENST00000623380 3095 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC079949.2-201ENST00000617117 2933 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 GUCY2GP-201ENST00000479705 3222 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 RNU6-251P-201ENST00000363235 104 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 RNY1P12-201ENST00000364251 105 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 RNU6-996P-201ENST00000365438 107 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 SNORA63.7-201ENST00000365579 123 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 RNU6-657P-201ENST00000383904 107 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 MIR654-201ENST00000385199 81 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 CES5AP1-201ENST00000400418 859 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 PPIAP2-201ENST00000414143 492 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 AL596448.1-201ENST00000415024 392 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 TMSB10P1-201ENST00000415070 132 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 MTND3P16-201ENST00000452205 344 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 RN7SL745P-201ENST00000484900 299 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 AC098583.2-201ENST00000504151 372 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 SCARNA6.1-201ENST00000516989 238 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 AC104986.1-201ENST00000517978 436 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms