Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 CRIP1P1-201ENST00000427567 185 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 AL360081.1-201ENST00000428299 555 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD9AQ99638 REREP2Y-201ENST00000439103 200 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD9AQ99638 RPL31P44-201ENST00000447680 377 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 snoU13.29-201ENST00000459370 104 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.87□□□□□ -1.47
RAD9AQ99638 TOMM22P4-201ENST00000511318 336 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.87□□□□□ -1.47
RAD9AQ99638 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD9AQ99638 PMS2P3-207ENST00000529061 717 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 AC024940.3-201ENST00000538551 316 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAD9AQ99638 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.87□□□□□ -1.47
RAD9AQ99638 DHFRP1-201ENST00000579682 559 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RAD9AQ99638 AL355834.1-201ENST00000556602 3965 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 MTCO1P22-201ENST00000604619 1360 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 CASC19-255ENST00000641733 1385 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RAD9AQ99638 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAD9AQ99638 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAD9AQ99638 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
RAD9AQ99638 AC005725.1-201ENST00000577346 2607 ntBASIC5.87□□□□□ -1.47
RAD9AQ99638 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAD9AQ99638 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.87□□□□□ -1.47
RAD9AQ99638 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RAD9AQ99638 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
RAD9AQ99638 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RAD9AQ99638 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.86□□□□□ -1.47
RAD9AQ99638 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAD9AQ99638 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
RAD9AQ99638 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.86□□□□□ -1.47
RAD9AQ99638 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
RAD9AQ99638 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RAD9AQ99638 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.86□□□□□ -1.47
RAD9AQ99638 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RAD9AQ99638 RNA5SP123-201ENST00000363244 119 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 RN7SKP186-201ENST00000365371 303 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD9AQ99638 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.86□□□□□ -1.47
RAD9AQ99638 AC092324.1-201ENST00000468671 324 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 TRBV5-2-201ENST00000489095 273 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD9AQ99638 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.86□□□□□ -1.47
RAD9AQ99638 AC004980.4-201ENST00000513375 203 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.86□□□□□ -1.47
RAD9AQ99638 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD9AQ99638 AC137768.1-201ENST00000549998 553 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 EIF1AXP2-201ENST00000555940 413 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 AC005341.1-201ENST00000571086 708 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
RAD9AQ99638 AF230666.2-201ENST00000602328 725 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 LSM1P2-201ENST00000604911 322 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 uc_338.18-201ENST00000615451 175 ntBASIC5.86□□□□□ -1.47
RAD9AQ99638 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.86□□□□□ -1.47
RAD9AQ99638 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD9AQ99638 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
RAD9AQ99638 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RAD9AQ99638 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
RAD9AQ99638 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.86□□□□□ -1.47
RAD9AQ99638 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RAD9AQ99638 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.85□□□□□ -1.47
RAD9AQ99638 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAD9AQ99638 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAD9AQ99638 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.85□□□□□ -1.47
RAD9AQ99638 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RAD9AQ99638 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAD9AQ99638 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAD9AQ99638 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RAD9AQ99638 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RAD9AQ99638 RN7SKP104-201ENST00000362605 328 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 SNORD1C-201ENST00000363315 78 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 RNU11-201ENST00000387069 134 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 RNA5SP91-201ENST00000390902 119 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 AL445213.1-201ENST00000412589 747 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 MTATP6P19-201ENST00000413797 659 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 AC245028.1-201ENST00000423259 256 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.85□□□□□ -1.47
RAD9AQ99638 USP9YP9-201ENST00000429406 715 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.85□□□□□ -1.47
RAD9AQ99638 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.85□□□□□ -1.47
RAD9AQ99638 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.85□□□□□ -1.47
RAD9AQ99638 NANOGP9-201ENST00000439890 892 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 GAPDHP25-201ENST00000447061 1001 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 MTND6P5-201ENST00000448266 512 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.85□□□□□ -1.47
RAD9AQ99638 AC009127.1-201ENST00000467090 155 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.85□□□□□ -1.47
RAD9AQ99638 AC090058.1-201ENST00000498788 435 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.85□□□□□ -1.47
RAD9AQ99638 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.85□□□□□ -1.47
RAD9AQ99638 MORF4L2P1-201ENST00000503761 858 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.85□□□□□ -1.47
RAD9AQ99638 AC005000.1-201ENST00000536192 288 ntBASIC5.85□□□□□ -1.47
RAD9AQ99638 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.85□□□□□ -1.47
RAD9AQ99638 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.85□□□□□ -1.47
RAD9AQ99638 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.85□□□□□ -1.47
RAD9AQ99638 AL360012.1-201ENST00000602813 131 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms