Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 UGT2B25P-201ENST00000511504 1586 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 RNU6-500P-201ENST00000362349 107 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 RNU6-253P-201ENST00000384730 105 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 MIR199B-201ENST00000384849 110 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AL391419.1-201ENST00000398901 1275 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 PSMA6P1-201ENST00000400275 741 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 RN7SKP271-201ENST00000410528 320 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 RN7SKP296-201ENST00000411185 341 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 XIST-201ENST00000416330 750 ntTSL 2 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 PAICSP7-201ENST00000419829 962 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AL035458.1-201ENST00000433096 585 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 RPL5P10-201ENST00000445207 894 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 EEF1E1P1-201ENST00000446998 430 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 MTCO1P48-201ENST00000448024 1096 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 RPS20P4-201ENST00000461659 355 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC004924.1-201ENST00000480160 781 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC022415.1-202ENST00000486612 523 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC018797.1-201ENST00000510791 255 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 DPPA3P2-202ENST00000557188 1219 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 MIR3912-201ENST00000577566 105 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AL049840.5-201ENST00000602827 552 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC083899.3-201ENST00000603413 594 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC119501.1-201ENST00000603646 475 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC025449.1-201ENST00000603896 529 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC128687.2-201ENST00000609657 566 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC073592.6-201ENST00000624271 415 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC073593.1-201ENST00000624500 411 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC015726.3-201ENST00000624501 418 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 PCMTD1P7-201ENST00000634506 357 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC099654.5-201ENST00000636479 350 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC073869.7-201ENST00000640874 297 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC010325.3-201ENST00000641084 394 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 ABCA11P-202ENST00000504019 2110 ntBASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC85AQ96PX6 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 AP004289.1-201ENST00000436307 2205 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 AC010132.2-201ENST00000295493 1043 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 RNU4-91P-201ENST00000364778 135 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 SNORA75-201ENST00000384158 137 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 RNU6-316P-201ENST00000391027 107 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 RNA5SP115-201ENST00000411160 107 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 RPS26P13-201ENST00000419030 330 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 RPL21P43-201ENST00000425440 472 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 OR5AW1P-201ENST00000426334 1006 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 ARL6IP1P2-201ENST00000431356 563 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 ATP5F1P1-201ENST00000433775 569 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 ARAFP2-201ENST00000440565 559 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 SNRPEP8-201ENST00000442866 260 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 AC007383.1-201ENST00000445875 636 ntBASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC8.23□□□□□ -1.09
CCDC85AQ96PX6 SNRPGP9-201ENST00000456025 225 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms