Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CCDC7Q96M83 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CCDC7Q96M83 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC7Q96M83 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.35□□□□□ -1.23
CCDC7Q96M83 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC7Q96M83 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC7Q96M83 U3.3-201ENST00000362986 216 ntBASIC7.34□□□□□ -1.23
CCDC7Q96M83 RNU1-149P-201ENST00000390870 161 ntBASIC7.34□□□□□ -1.23
CCDC7Q96M83 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 PRPF38AP1-201ENST00000451976 933 ntBASIC7.34□□□□□ -1.23
CCDC7Q96M83 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 AC013701.1-201ENST00000522657 465 ntBASIC7.34□□□□□ -1.23
CCDC7Q96M83 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 AC127381.1-201ENST00000555979 939 ntBASIC7.34□□□□□ -1.23
CCDC7Q96M83 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC7Q96M83 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC7Q96M83 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC7Q96M83 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 SNORA5.1-201ENST00000384275 131 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC090018.1-201ENST00000434369 367 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 EIF3KP3-201ENST00000514461 639 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 PRPF19P1-201ENST00000584766 898 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC005252.1-201ENST00000604518 1063 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 AL137918.1-201ENST00000624542 1922 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 MIR133A2-201ENST00000347538 102 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 RNU1-43P-201ENST00000365052 165 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 RN7SKP16-201ENST00000410180 299 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 PA2G4P6-201ENST00000438325 1197 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 Z80107.2-201ENST00000445127 392 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 GAPDHP14-201ENST00000450472 937 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 CBX1P2-201ENST00000453841 458 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 DNAJB5P1-201ENST00000454004 806 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC098976.1-201ENST00000513014 541 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC006427.1-201ENST00000514359 712 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 CR383656.6-201ENST00000550518 394 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC027216.1-201ENST00000577726 685 ntBASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.33□□□□□ -1.24
CCDC7Q96M83 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC7Q96M83 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC7Q96M83 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC7Q96M83 AC092376.2-201ENST00000622621 4116 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 AC114947.2-201ENST00000565748 2125 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC7Q96M83 AC092747.4-201ENST00000620519 1861 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC7Q96M83 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC7Q96M83 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC7Q96M83 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.32□□□□□ -1.24
CCDC7Q96M83 RN7SKP103-201ENST00000363848 320 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 RNU6ATAC7P-201ENST00000408111 127 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC7Q96M83 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC7Q96M83 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC7Q96M83 AC093655.2-201ENST00000425735 631 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 AC006466.1-201ENST00000438721 289 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC7Q96M83 OR52E3P-201ENST00000452083 936 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 OR51A1P-201ENST00000511110 946 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 AC022360.1-201ENST00000521058 340 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC7Q96M83 FAM25E-202ENST00000608562 189 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 AP005131.7-201ENST00000610087 611 ntBASIC7.32□□□□□ -1.24
CCDC7Q96M83 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms