Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC021483.2-201ENST00000567415 758 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 AL359513.1-201ENST00000614364 557 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 MIR8080-201ENST00000622224 89 ntBASIC5.81□□□□□ -1.48
HMGB4Q8WW32 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGB4Q8WW32 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC006511.3-201ENST00000624929 1783 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC110373.1-201ENST00000505994 3505 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 SNORD8-201ENST00000363915 110 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AL158050.1-201ENST00000416077 457 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 NPM1P22-201ENST00000427761 952 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 BX119904.1-201ENST00000432026 348 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 PTMAP6-201ENST00000439110 327 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AL162739.1-201ENST00000450606 307 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 RANP1-206ENST00000455094 651 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC011225.1-201ENST00000457751 369 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 RNU1-88P-201ENST00000459274 128 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 RPL5P13-201ENST00000462840 709 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 RPL38P3-201ENST00000484463 213 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 OR11I1P-201ENST00000486033 954 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 RN7SL30P-201ENST00000488416 306 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 MTCO3P27-201ENST00000514397 196 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC139365.2-201ENST00000517972 253 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 OR10G5P-201ENST00000532733 358 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC008126.1-201ENST00000549019 480 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC015720.2-201ENST00000567709 334 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 BNIP3P32-201ENST00000600015 554 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC079880.2-201ENST00000603790 1213 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC026979.4-201ENST00000606555 645 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC112503.2-201ENST00000609005 552 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC004948.1-201ENST00000609858 672 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC008115.4-201ENST00000619780 775 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 RPL23AP61-201ENST00000623642 466 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 MFSD8-219ENST00000641228 2559 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 ZNF402P-201ENST00000404435 3100 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 AL121768.1-201ENST00000613917 2544 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 SNX18P3-202ENST00000565670 1750 ntBASIC5.8□□□□□ -1.48
HMGB4Q8WW32 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGB4Q8WW32 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
HMGB4Q8WW32 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms