Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC025768.1-201ENST00000510057 267 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 MTND1P36-201ENST00000522384 936 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC022832.1-201ENST00000530718 645 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 HNRNPCP1-201ENST00000556181 766 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AP004372.1-201ENST00000604842 844 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AC133644.2-201ENST00000608142 540 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 AP002371.2-201ENST00000624450 503 ntBASIC6.18□□□□□ -1.42
HERC6Q8IVU3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
HERC6Q8IVU3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 RNA5SP105-201ENST00000391123 113 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AL589647.1-201ENST00000402485 466 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AL139128.1-201ENST00000413921 941 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC007563.3-201ENST00000433233 371 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 ELOCP3-201ENST00000439303 348 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AL627224.1-201ENST00000448334 444 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 RPS23P9-201ENST00000448848 438 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 OR11I1P-201ENST00000486033 954 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC093815.1-201ENST00000508637 280 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 RN7SKP34-201ENST00000516142 244 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 RNA5SP228-201ENST00000516232 133 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 DUX4L52-201ENST00000549363 777 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC126177.5-201ENST00000549599 178 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC090079.2-201ENST00000575289 768 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 MIR3691-201ENST00000578066 90 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 MIR4646-201ENST00000580775 63 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 BMS1P7-201ENST00000602440 1052 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AL671309.1-201ENST00000603750 544 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC135803.1-201ENST00000608748 565 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC126915.2-201ENST00000610957 190 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AP001784.1-201ENST00000624107 428 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC019080.5-201ENST00000624891 757 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 AC009501.3-201ENST00000605001 1352 ntBASIC6.17□□□□□ -1.42
HERC6Q8IVU3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HERC6Q8IVU3 LINC01963-201ENST00000562038 3148 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 SNORA56-201ENST00000383966 129 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 GSTA12P-201ENST00000402398 508 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AL390774.1-201ENST00000411924 246 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 NENFP1-201ENST00000419476 466 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AC073464.3-201ENST00000422564 712 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 PSMD10P3-201ENST00000437000 448 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AC245517.2-201ENST00000442890 346 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 MTND2P30-201ENST00000456663 382 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AC098583.1-201ENST00000480875 255 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 RPL38P3-201ENST00000484463 213 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AC093663.2-201ENST00000484625 313 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AC073610.1-201ENST00000489971 396 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AC074255.1-201ENST00000511259 501 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AP003049.1-201ENST00000529418 457 ntBASIC6.16□□□□□ -1.42
HERC6Q8IVU3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.16□□□□□ -1.42
HERC6Q8IVU3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms