Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RPS7P2-201ENST00000435134 607 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 AL445928.1-201ENST00000435545 222 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 BMS1P10-201ENST00000443754 1120 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC023245.1-201ENST00000468501 517 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 RPL21P18-201ENST00000469899 480 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 RN7SL193P-201ENST00000491708 276 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 OR9N1P-202ENST00000494289 481 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 LSM3P4-201ENST00000502948 309 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC113420.1-201ENST00000507903 571 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 HPRT1P1-201ENST00000509498 657 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 RNU5A-4P-201ENST00000516588 111 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC093014.1-201ENST00000548926 724 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AL049779.3-201ENST00000557141 606 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 MIR4271-201ENST00000582451 67 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC068790.6-201ENST00000602558 258 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC004492.1-201ENST00000607036 742 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 MIR6071-201ENST00000616741 78 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC026124.2-201ENST00000621847 656 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AC087565.3-202ENST00000642085 1603 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK3Q8IV63 QRSL1P1-201ENST00000400977 1540 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VRK3Q8IV63 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VRK3Q8IV63 AL161756.3-201ENST00000641216 2071 ntBASIC5.83□□□□□ -1.48
VRK3Q8IV63 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 CAP1P2-201ENST00000417455 1409 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VRK3Q8IV63 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VRK3Q8IV63 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VRK3Q8IV63 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VRK3Q8IV63 MIR421-201ENST00000365696 85 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC004386.1-201ENST00000393214 761 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 RPL23AP17-201ENST00000401064 499 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 NPM1P37-201ENST00000403105 874 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 AL096800.1-201ENST00000405326 893 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 HMGB1P49-201ENST00000418882 569 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 TIMM9P2-201ENST00000419324 266 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC099677.3-201ENST00000427081 395 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC115283.1-201ENST00000427353 400 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 RPL38P3-201ENST00000484463 213 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 MTCYBP16-201ENST00000509187 1129 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VRK3Q8IV63 TOMM22P4-201ENST00000511318 336 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AP003717.3-201ENST00000544832 1180 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC007956.1-201ENST00000555623 542 ntBASIC5.82□□□□□ -1.48
VRK3Q8IV63 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms