Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AP000769.2-201ENST00000602344 396 ntBASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 AL691477.1-201ENST00000624398 162 ntBASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 AL390318.1-201ENST00000624564 687 ntBASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 PROS2P-201ENST00000474651 1951 ntBASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CRLF3Q8IUI8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 RMRPP5-201ENST00000411156 267 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 DPPA2P2-201ENST00000418220 897 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 RN7SL72P-201ENST00000460697 269 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC093827.1-201ENST00000480094 861 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 RN7SL466P-201ENST00000497546 295 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 MRPS16P1-201ENST00000523462 412 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC022884.2-201ENST00000578535 580 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 MIR4472-2-201ENST00000582069 67 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AL589674.2-201ENST00000604304 337 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC109583.2-201ENST00000617367 129 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 MIR6839-201ENST00000620425 113 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 MRE11P1-201ENST00000464884 2127 ntBASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CRLF3Q8IUI8 SRRM1P3-201ENST00000426911 2678 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 MIR551A-201ENST00000385042 96 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 MIR143-201ENST00000385300 106 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 OR6E1P-201ENST00000414424 923 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AL596448.1-201ENST00000415024 392 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC124944.2-201ENST00000429866 1242 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC005297.1-201ENST00000444765 862 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 RPL15P21-201ENST00000495592 567 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AL049872.1-201ENST00000556323 322 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC009027.1-201ENST00000604510 479 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC022467.1-201ENST00000614738 749 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC008115.3-201ENST00000614874 549 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 CU639417.4-201ENST00000623928 207 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AP003400.3-201ENST00000624904 346 ntBASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.31□□□□□ -1.56
CRLF3Q8IUI8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CRLF3Q8IUI8 YES1P1-201ENST00000418510 1628 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms