Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 NPM1P22-201ENST00000427761 952 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 MRPS33P4-201ENST00000434892 317 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 OR7E116P-201ENST00000448529 957 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC022215.1-201ENST00000481770 362 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC093890.1-201ENST00000502554 540 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC105384.2-201ENST00000508433 640 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 GLUD1P3-202ENST00000508551 200 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 BTG4P1-201ENST00000510421 183 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 SNORD46.2-201ENST00000516021 102 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC021678.3-201ENST00000517893 476 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC026688.1-201ENST00000520639 1168 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC136777.2-201ENST00000522979 358 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 TRIM51DP-201ENST00000529746 596 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC096996.1-201ENST00000563813 325 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 MIR4310-201ENST00000582950 57 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AL513327.3-201ENST00000602618 469 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC006363.1-201ENST00000603806 463 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 RN7SL544P-201ENST00000617232 284 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AL162233.1-201ENST00000620014 944 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 RN7SL763P-201ENST00000620922 284 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 TMEM30CP-203ENST00000637814 1035 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 KARSP1-201ENST00000451871 1752 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC025470.1-201ENST00000510053 2032 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 AL359955.1-201ENST00000455242 3275 ntBASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
NUP54Q7Z3B4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 OR13C1P-202ENST00000641378 2919 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AL450326.2-201ENST00000421913 1962 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 RNU11-201ENST00000387069 134 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 HMGB3P24-201ENST00000433260 622 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 RPL23AP19-201ENST00000436229 369 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 MEMO1P4-201ENST00000453590 386 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 EIF2S2P4-201ENST00000461070 984 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC007998.1-201ENST00000474156 672 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 ACTR6P1-201ENST00000514311 1104 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC139365.2-201ENST00000517972 253 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AL360012.1-201ENST00000602813 131 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC022919.1-201ENST00000624979 626 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 AC000095.2-202ENST00000637415 154 ntBASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms