Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 HNRNPCP1-201ENST00000556181 766 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 AC106052.1-201ENST00000608029 497 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 SNORA17.5-201ENST00000630429 132 ntBASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC144BQ3MJ40 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC011455.2-201ENST00000599320 3336 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 SNORA21-201ENST00000362423 132 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 RNA5SP273-201ENST00000362484 113 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 SNORD65C-201ENST00000390962 71 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AL035419.1-201ENST00000397037 564 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 RN7SKP222-201ENST00000410651 315 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 OR51B3P-201ENST00000412287 913 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC092651.1-201ENST00000426110 312 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC245884.2-201ENST00000426257 404 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC022022.1-201ENST00000430304 178 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC002542.1-201ENST00000440683 193 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC002553.3-201ENST00000453002 341 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC007998.1-201ENST00000474156 672 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 RN7SL174P-201ENST00000475578 289 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC091965.3-201ENST00000506236 208 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC008837.1-201ENST00000511513 412 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 RN7SKP287-201ENST00000516546 266 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 OR8I1P-201ENST00000529291 931 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC087897.1-201ENST00000550134 156 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC022022.2-201ENST00000602989 360 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC005377.1-201ENST00000605126 456 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AL450336.1-201ENST00000605180 586 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 MIR6886-201ENST00000619864 61 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC097655.1-201ENST00000635075 318 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AL121768.1-201ENST00000613917 2544 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 AC008627.1-201ENST00000517511 1704 ntBASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CCDC144BQ3MJ40 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CCDC144BQ3MJ40 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CCDC144BQ3MJ40 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.09□□□□□ -1.28
CCDC144BQ3MJ40 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.09□□□□□ -1.28
CCDC144BQ3MJ40 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 SHQ1P1-201ENST00000437111 1544 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 RNU1-134P-201ENST00000362935 165 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 AC092447.3-201ENST00000426027 686 ntBASIC7.08□□□□□ -1.28
CCDC144BQ3MJ40 FTH1P16-201ENST00000435241 552 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 269 ms