Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDH1Q08174 FGF7P8-201ENST00000402994 292 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 RNU6-77P-201ENST00000410554 91 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 RPS21P8-201ENST00000413365 247 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 VDAC1P10-201ENST00000416715 891 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 CHCHD3P1-201ENST00000425516 676 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 FABP5P2-201ENST00000439042 408 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 RAB11AP1-201ENST00000442978 646 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 TRIM60P16-201ENST00000444048 694 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 DNAJC19P8-201ENST00000452887 259 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 BZW1P1-201ENST00000454901 1240 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 WBP1LP1-201ENST00000460451 896 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 KLF3P2-201ENST00000465138 268 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 RPL30P9-201ENST00000465586 330 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 RPS3AP17-201ENST00000472594 777 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 MYL6P4-201ENST00000477911 453 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 RPL23AP8-201ENST00000479812 475 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AC023424.2-201ENST00000493479 777 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 RPL7L1P4-201ENST00000513004 707 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC090971.3-201ENST00000557871 1041 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 PCMTD1P2-201ENST00000565017 355 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 FAM106CP-201ENST00000582212 507 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AC125494.2-201ENST00000602431 657 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC087894.3-201ENST00000623682 349 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 CLUHP10-201ENST00000631979 980 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC129502.1-201ENST00000623261 1654 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 LYARP1-201ENST00000436977 1501 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDH1Q08174 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDH1Q08174 AL049634.1-201ENST00000453770 1720 ntBASIC6.79□□□□□ -1.32
PCDH1Q08174 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDH1Q08174 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDH1Q08174 OR5M2P-202ENST00000641241 4242 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDH1Q08174 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC125232.1-201ENST00000452554 1408 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 AC103591.2-201ENST00000265259 766 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDH1Q08174 RNU6-1339P-201ENST00000363574 91 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 RNU5F-7P-201ENST00000363696 115 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 RNU6-501P-201ENST00000364072 100 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PCDH1Q08174 FAUP2-201ENST00000394301 401 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC003045.1-201ENST00000398779 713 ntBASIC6.78□□□□□ -1.32
PCDH1Q08174 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDH1Q08174 CIR1P3-201ENST00000405137 479 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms