Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 THAP12P5-201ENST00000405864 2275 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SCN1BQ07699 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 ADAM5-202ENST00000399789 1942 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SCN1BQ07699 RNFT1P3-201ENST00000340898 1052 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 RN7SKP74-201ENST00000362849 309 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 SNORD51.1-201ENST00000365405 77 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN1BQ07699 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 RPS27AP11-201ENST00000402798 447 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN1BQ07699 RNU2-50P-201ENST00000410494 143 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN1BQ07699 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN1BQ07699 GNG5P5-201ENST00000420444 220 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AL139158.1-201ENST00000424719 340 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC092865.3-201ENST00000425390 1026 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN1BQ07699 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN1BQ07699 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN1BQ07699 AL590004.3-202ENST00000445883 451 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN1BQ07699 HMGB1P5-202ENST00000451497 985 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC002553.3-201ENST00000453002 341 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 CLIC4P1-201ENST00000453177 535 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 MEMO1P4-201ENST00000453590 386 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 CEACAMP11-201ENST00000455211 583 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN1BQ07699 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 PSAT1P4-201ENST00000466500 526 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 RPL38P3-201ENST00000484463 213 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC116562.1-201ENST00000485355 781 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 AC021193.1-201ENST00000511607 420 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC098976.1-201ENST00000513014 541 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 HMGN1P17-201ENST00000513734 295 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN1BQ07699 AC116917.1-201ENST00000520558 305 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.06□□□□□ -1.6
SCN1BQ07699 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 AC107918.3-201ENST00000533272 382 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN1BQ07699 BTG1P1-201ENST00000540396 508 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.06□□□□□ -1.6
SCN1BQ07699 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN1BQ07699 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.06□□□□□ -1.6
SCN1BQ07699 AC040174.2-201ENST00000602701 465 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC005828.7-201ENST00000607331 556 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC025016.1-201ENST00000616746 682 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN1BQ07699 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN1BQ07699 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN1BQ07699 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 AC019072.1-201ENST00000604535 1551 ntBASIC5.06□□□□□ -1.6
SCN1BQ07699 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SCN1BQ07699 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN1BQ07699 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SCN1BQ07699 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
SCN1BQ07699 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN1BQ07699 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN1BQ07699 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN1BQ07699 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN1BQ07699 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN1BQ07699 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN1BQ07699 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN1BQ07699 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN1BQ07699 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN1BQ07699 SNORA21-201ENST00000362423 132 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 RN7SKP78-201ENST00000364711 318 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 RNA5SP211-201ENST00000365516 117 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN1BQ07699 AC093719.1-202ENST00000392735 373 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SCN1BQ07699 EI24P3-201ENST00000399046 1062 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 NCSTNP1-201ENST00000406229 144 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 RN7SKP146-201ENST00000410242 334 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 RNA5SP498-201ENST00000411342 120 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN1BQ07699 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.05□□□□□ -1.6
SCN1BQ07699 AC009302.1-201ENST00000417147 390 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN1BQ07699 Z82198.3-201ENST00000421145 199 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 AC099336.2-201ENST00000422457 254 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 FAR1P1-201ENST00000427163 934 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN1BQ07699 MTCO3P21-201ENST00000430791 643 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 ZNF965P-201ENST00000432501 817 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN1BQ07699 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN1BQ07699 OR52E3P-201ENST00000452083 936 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 TAAR4P-201ENST00000454843 1039 ntBASIC5.05□□□□□ -1.6
SCN1BQ07699 AC099560.2-201ENST00000457554 255 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms