Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCNA1P78396 MSL3P1-202ENST00000440028 1468 ntBASIC6.14□□□□□ -1.43
CCNA1P78396 THAP12P4-201ENST00000528321 2266 ntBASIC6.14□□□□□ -1.43
CCNA1P78396 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.13□□□□□ -1.43
CCNA1P78396 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.13□□□□□ -1.43
CCNA1P78396 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCNA1P78396 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CCNA1P78396 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.13□□□□□ -1.43
CCNA1P78396 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 RN7SKP186-201ENST00000365371 303 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 SNORA70.9-201ENST00000384370 135 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 MIR600-201ENST00000385007 98 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 AL121977.1-201ENST00000401636 979 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.13□□□□□ -1.43
CCNA1P78396 REREP1Y-201ENST00000422655 198 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.13□□□□□ -1.43
CCNA1P78396 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.13□□□□□ -1.43
CCNA1P78396 AL049745.1-201ENST00000433953 286 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.13□□□□□ -1.43
CCNA1P78396 REREP2Y-201ENST00000439103 200 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCNA1P78396 AZGP1P2-201ENST00000454506 345 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.13□□□□□ -1.43
CCNA1P78396 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.13□□□□□ -1.43
CCNA1P78396 OR5AZ1P-201ENST00000527448 943 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 AC134349.2-201ENST00000535136 910 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.13□□□□□ -1.43
CCNA1P78396 AC105036.1-201ENST00000566222 271 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 AC007066.2-202ENST00000566531 914 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.13□□□□□ -1.43
CCNA1P78396 RN7SL356P-201ENST00000582228 248 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.13□□□□□ -1.43
CCNA1P78396 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.13□□□□□ -1.43
CCNA1P78396 AC091953.3-201ENST00000623220 236 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 AC091905.4-201ENST00000623432 202 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.13□□□□□ -1.43
CCNA1P78396 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 UGT2B24P-201ENST00000514441 1597 ntBASIC6.13□□□□□ -1.43
CCNA1P78396 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.13□□□□□ -1.43
CCNA1P78396 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCNA1P78396 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.13□□□□□ -1.43
CCNA1P78396 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.13□□□□□ -1.43
CCNA1P78396 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCNA1P78396 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCNA1P78396 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCNA1P78396 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCNA1P78396 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCNA1P78396 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCNA1P78396 GNG5P2-201ENST00000372054 207 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 SNORA51.8-201ENST00000384234 132 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.12□□□□□ -1.43
CCNA1P78396 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.12□□□□□ -1.43
CCNA1P78396 AC104837.2-201ENST00000427236 424 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 USP24P1-201ENST00000433802 779 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 RN7SL423P-201ENST00000486202 304 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.12□□□□□ -1.43
CCNA1P78396 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 INTS6P1-201ENST00000504674 2530 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.12□□□□□ -1.43
CCNA1P78396 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.12□□□□□ -1.43
CCNA1P78396 OR4A6P-201ENST00000534364 970 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 AC005000.1-201ENST00000536192 288 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.12□□□□□ -1.43
CCNA1P78396 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.12□□□□□ -1.43
CCNA1P78396 AC011487.3-201ENST00000593607 453 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 AC093909.5-201ENST00000621839 1799 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 PANDAR-201ENST00000629595 1506 ntBASIC6.12□□□□□ -1.43
CCNA1P78396 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCNA1P78396 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.12□□□□□ -1.43
CCNA1P78396 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CCNA1P78396 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCNA1P78396 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCNA1P78396 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.11□□□□□ -1.43
CCNA1P78396 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCNA1P78396 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCNA1P78396 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms