Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC136428.4-201ENST00000634254 1155 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 AC119674.1-212ENST00000641155 993 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
RHBDL3P58872 PABPC1P6-201ENST00000445594 1829 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
RHBDL3P58872 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.73□□□□□ -1.33
RHBDL3P58872 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RHBDL3P58872 AC006484.1-201ENST00000435086 1884 ntBASIC6.73□□□□□ -1.33
RHBDL3P58872 PWAR1-201ENST00000624188 2414 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
RHBDL3P58872 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RHBDL3P58872 AL355834.1-201ENST00000556602 3965 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.72□□□□□ -1.33
RHBDL3P58872 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.72□□□□□ -1.33
RHBDL3P58872 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 AC093849.1-201ENST00000563631 2209 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.72□□□□□ -1.33
RHBDL3P58872 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 GAPDHP24-201ENST00000328713 983 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 RNA5SP319-201ENST00000362768 119 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 RNU6-249P-201ENST00000363016 102 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 SNORD1C-201ENST00000363315 78 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.72□□□□□ -1.33
RHBDL3P58872 USP24P1-201ENST00000433802 779 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.72□□□□□ -1.33
RHBDL3P58872 RPS26P41-201ENST00000450370 284 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.72□□□□□ -1.33
RHBDL3P58872 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.72□□□□□ -1.33
RHBDL3P58872 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.72□□□□□ -1.33
RHBDL3P58872 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.72□□□□□ -1.33
RHBDL3P58872 AL512310.9-201ENST00000553311 948 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.72□□□□□ -1.33
RHBDL3P58872 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.72□□□□□ -1.33
RHBDL3P58872 AGGF1P7-201ENST00000562369 913 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.72□□□□□ -1.33
RHBDL3P58872 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.72□□□□□ -1.33
RHBDL3P58872 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.72□□□□□ -1.33
RHBDL3P58872 AC012616.1-201ENST00000600294 197 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 AC135178.6-201ENST00000605314 398 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 Z95327.3-201ENST00000610385 572 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 AC109780.1-201ENST00000451768 1344 ntBASIC6.72□□□□□ -1.33
RHBDL3P58872 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.72□□□□□ -1.33
RHBDL3P58872 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
RHBDL3P58872 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RHBDL3P58872 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
RHBDL3P58872 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.71□□□□□ -1.33
RHBDL3P58872 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
RHBDL3P58872 AL590763.1-201ENST00000398297 1545 ntBASIC6.71□□□□□ -1.33
RHBDL3P58872 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.71□□□□□ -1.33
RHBDL3P58872 AL033543.1-201ENST00000623440 13454 ntBASIC6.71□□□□□ -1.33
RHBDL3P58872 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
RHBDL3P58872 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RHBDL3P58872 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.71□□□□□ -1.33
RHBDL3P58872 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
RHBDL3P58872 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.71□□□□□ -1.33
RHBDL3P58872 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.71□□□□□ -1.34
RHBDL3P58872 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.71□□□□□ -1.34
RHBDL3P58872 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
RHBDL3P58872 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 RNU4-31P-201ENST00000384211 141 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.71□□□□□ -1.34
RHBDL3P58872 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.71□□□□□ -1.34
RHBDL3P58872 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.71□□□□□ -1.34
RHBDL3P58872 AL627308.1-201ENST00000435693 821 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 CYCSP11-201ENST00000436426 315 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 AC008953.1-201ENST00000497334 318 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 AC025768.1-201ENST00000510057 267 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.71□□□□□ -1.34
RHBDL3P58872 AC139697.1-201ENST00000548429 745 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.71□□□□□ -1.34
RHBDL3P58872 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.71□□□□□ -1.34
RHBDL3P58872 CD24P2-201ENST00000565486 219 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 MIR4311-201ENST00000580794 100 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.71□□□□□ -1.34
RHBDL3P58872 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 AC092474.3-201ENST00000603022 568 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.71□□□□□ -1.34
RHBDL3P58872 AL031658.2-201ENST00000616850 651 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.71□□□□□ -1.34
RHBDL3P58872 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.71□□□□□ -1.34
RHBDL3P58872 SAMMSON-209ENST00000641222 1100 ntBASIC6.71□□□□□ -1.34
RHBDL3P58872 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RHBDL3P58872 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms