Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN18P56856 TTC39DP-201ENST00000416781 1688 ntBASIC4.88□□□□□ -1.63
CLDN18P56856 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN18P56856 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN18P56856 OR9K1P-202ENST00000641111 3217 ntBASIC4.88□□□□□ -1.63
CLDN18P56856 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN18P56856 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN18P56856 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN18P56856 AC006206.1-201ENST00000544842 3387 ntBASIC4.88□□□□□ -1.63
CLDN18P56856 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN18P56856 AC083899.1-201ENST00000454465 3819 ntBASIC4.88□□□□□ -1.63
CLDN18P56856 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN18P56856 MIPEPP2-201ENST00000422560 1819 ntBASIC4.88□□□□□ -1.63
CLDN18P56856 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CLDN18P56856 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN18P56856 CUL4AP1-201ENST00000514750 1863 ntBASIC4.88□□□□□ -1.63
CLDN18P56856 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CLDN18P56856 AL353796.1-201ENST00000561542 3241 ntBASIC4.87□□□□□ -1.63
CLDN18P56856 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN18P56856 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLDN18P56856 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN18P56856 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN18P56856 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN18P56856 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN18P56856 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN18P56856 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN18P56856 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN18P56856 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN18P56856 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN18P56856 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN18P56856 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN18P56856 AC021106.1-201ENST00000509020 1058 ntBASIC4.87□□□□□ -1.63
CLDN18P56856 AC109464.1-201ENST00000511091 819 ntBASIC4.87□□□□□ -1.63
CLDN18P56856 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN18P56856 HMGB1P40-201ENST00000525121 540 ntBASIC4.87□□□□□ -1.63
CLDN18P56856 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN18P56856 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN18P56856 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN18P56856 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN18P56856 AC009237.13-201ENST00000603193 276 ntBASIC4.87□□□□□ -1.63
CLDN18P56856 AL158062.1-201ENST00000619632 745 ntBASIC4.87□□□□□ -1.63
CLDN18P56856 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN18P56856 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN18P56856 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.87□□□□□ -1.63
CLDN18P56856 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN18P56856 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN18P56856 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN18P56856 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN18P56856 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN18P56856 AL590763.1-201ENST00000398297 1545 ntBASIC4.87□□□□□ -1.63
CLDN18P56856 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CLDN18P56856 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN18P56856 AL355488.2-201ENST00000609909 2850 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.86□□□□□ -1.63
CLDN18P56856 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN18P56856 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN18P56856 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN18P56856 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN18P56856 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN18P56856 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN18P56856 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN18P56856 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CLDN18P56856 AC005005.4-201ENST00000623789 16698 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CLDN18P56856 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN18P56856 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN18P56856 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN18P56856 AC005294.1-201ENST00000355509 281 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 U3.7-201ENST00000363668 216 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 SNORD56.6-201ENST00000384569 71 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CLDN18P56856 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.86□□□□□ -1.63
CLDN18P56856 AC098592.2-201ENST00000413158 265 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN18P56856 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.86□□□□□ -1.63
CLDN18P56856 BMS1P13-201ENST00000417301 885 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 AC106901.1-201ENST00000425086 698 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 FAM96AP1-201ENST00000430879 482 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN18P56856 AL035090.1-201ENST00000454835 332 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN18P56856 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN18P56856 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN18P56856 RN7SL799P-201ENST00000475891 298 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 RPS21P4-201ENST00000487122 248 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 RN7SL30P-201ENST00000488416 306 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN18P56856 RN7SKP34-201ENST00000516142 244 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 EIF4A2P5-201ENST00000529914 499 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 AP004607.2-201ENST00000533949 322 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN18P56856 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN18P56856 DUX4L52-201ENST00000549363 777 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN18P56856 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN18P56856 AC005341.1-201ENST00000571086 708 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CLDN18P56856 AP000769.2-201ENST00000602344 396 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 AC025857.2-201ENST00000602711 238 ntBASIC4.86□□□□□ -1.63
CLDN18P56856 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms