Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 Z83820.1-201ENST00000456978 1499 ntBASIC5.13□□□□□ -1.59
CDH11P55287 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.13□□□□□ -1.59
CDH11P55287 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH11P55287 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH11P55287 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CDH11P55287 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH11P55287 MIR375-201ENST00000362103 64 ntBASIC5.12□□□□□ -1.59
CDH11P55287 MIR365B-201ENST00000362317 111 ntBASIC5.12□□□□□ -1.59
CDH11P55287 RNA5SP326-201ENST00000363209 110 ntBASIC5.12□□□□□ -1.59
CDH11P55287 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH11P55287 CCNB2P1-201ENST00000399411 1150 ntBASIC5.12□□□□□ -1.59
CDH11P55287 RAB9AP4-201ENST00000415230 609 ntBASIC5.12□□□□□ -1.59
CDH11P55287 ARAFP1-201ENST00000422172 605 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH11P55287 AC073464.3-201ENST00000422564 712 ntBASIC5.12□□□□□ -1.59
CDH11P55287 RPS6P14-201ENST00000425165 719 ntBASIC5.12□□□□□ -1.59
CDH11P55287 NPM1P26-201ENST00000426339 738 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AL136231.1-201ENST00000429407 730 ntBASIC5.12□□□□□ -1.59
CDH11P55287 MTND4LP7-201ENST00000431728 294 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 RPL5P25-201ENST00000441148 775 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH11P55287 CBX1P2-201ENST00000453841 458 ntBASIC5.12□□□□□ -1.59
CDH11P55287 RN7SL72P-201ENST00000460697 269 ntBASIC5.12□□□□□ -1.59
CDH11P55287 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.12□□□□□ -1.59
CDH11P55287 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH11P55287 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.12□□□□□ -1.59
CDH11P55287 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH11P55287 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH11P55287 AC027544.3-201ENST00000535082 757 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AC006518.1-201ENST00000541449 943 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AC122688.1-201ENST00000541494 223 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH11P55287 AC074029.2-201ENST00000551045 634 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH11P55287 AC091078.2-201ENST00000557145 559 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH11P55287 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH11P55287 AP001496.3-201ENST00000580230 913 ntBASIC5.12□□□□□ -1.59
CDH11P55287 AC010503.3-201ENST00000594355 540 ntBASIC5.12□□□□□ -1.59
CDH11P55287 OR4H6P-202ENST00000603819 340 ntBASIC5.12□□□□□ -1.59
CDH11P55287 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.12□□□□□ -1.59
CDH11P55287 AC010632.3-201ENST00000611377 369 ntBASIC5.12□□□□□ -1.59
CDH11P55287 LINC00216-201ENST00000623548 1126 ntBASIC5.12□□□□□ -1.59
CDH11P55287 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CDH11P55287 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH11P55287 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH11P55287 CR382285.2-201ENST00000624662 1495 ntBASIC5.12□□□□□ -1.59
CDH11P55287 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH11P55287 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH11P55287 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH11P55287 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDH11P55287 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH11P55287 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH11P55287 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDH11P55287 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH11P55287 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDH11P55287 SNORA27.3-201ENST00000364937 134 ntBASIC5.11□□□□□ -1.59
CDH11P55287 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH11P55287 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 RNF10P1-201ENST00000418589 369 ntBASIC5.11□□□□□ -1.59
CDH11P55287 AK4P4-201ENST00000419465 646 ntBASIC5.11□□□□□ -1.59
CDH11P55287 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH11P55287 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH11P55287 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH11P55287 Z99127.2-201ENST00000441426 334 ntBASIC5.11□□□□□ -1.59
CDH11P55287 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH11P55287 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH11P55287 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 PSAT1P4-201ENST00000466500 526 ntBASIC5.11□□□□□ -1.59
CDH11P55287 AC022336.1-201ENST00000475510 337 ntBASIC5.11□□□□□ -1.59
CDH11P55287 RN7SL717P-201ENST00000478343 297 ntBASIC5.11□□□□□ -1.59
CDH11P55287 ATP5LP5-201ENST00000483050 299 ntBASIC5.11□□□□□ -1.59
CDH11P55287 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH11P55287 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms