Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC091390.1-201ENST00000433904 331 ntBASIC6.37□□□□□ -1.39
NUP98P52948 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.37□□□□□ -1.39
NUP98P52948 PRPF38AP2-201ENST00000438179 851 ntBASIC6.37□□□□□ -1.39
NUP98P52948 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.37□□□□□ -1.39
NUP98P52948 AL513533.1-201ENST00000453728 415 ntBASIC6.37□□□□□ -1.39
NUP98P52948 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 RPL23AP56-201ENST00000460778 453 ntBASIC6.37□□□□□ -1.39
NUP98P52948 RN7SL205P-201ENST00000490174 284 ntBASIC6.37□□□□□ -1.39
NUP98P52948 RPS12P31-201ENST00000491419 398 ntBASIC6.37□□□□□ -1.39
NUP98P52948 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.37□□□□□ -1.39
NUP98P52948 OR5AN2P-201ENST00000534535 896 ntBASIC6.37□□□□□ -1.39
NUP98P52948 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.37□□□□□ -1.39
NUP98P52948 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 RN7SL52P-201ENST00000584271 284 ntBASIC6.37□□□□□ -1.39
NUP98P52948 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 RN7SL722P-201ENST00000617780 284 ntBASIC6.37□□□□□ -1.39
NUP98P52948 RN7SL565P-201ENST00000618246 284 ntBASIC6.37□□□□□ -1.39
NUP98P52948 uc_338.7-201ENST00000621834 124 ntBASIC6.37□□□□□ -1.39
NUP98P52948 AP000346.3-201ENST00000622821 210 ntBASIC6.37□□□□□ -1.39
NUP98P52948 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.37□□□□□ -1.39
NUP98P52948 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUP98P52948 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUP98P52948 SDAD1P1-202ENST00000524156 2051 ntBASIC6.37□□□□□ -1.39
NUP98P52948 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUP98P52948 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NUP98P52948 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.37□□□□□ -1.39
NUP98P52948 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NUP98P52948 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.37□□□□□ -1.39
NUP98P52948 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
NUP98P52948 AC092681.1-201ENST00000297369 291 ntBASIC6.36□□□□□ -1.39
NUP98P52948 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NUP98P52948 AC126755.2-208ENST00000327792 462 ntBASIC6.36□□□□□ -1.39
NUP98P52948 AC138969.1-213ENST00000331436 462 ntBASIC6.36□□□□□ -1.39
NUP98P52948 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.36□□□□□ -1.39
NUP98P52948 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NUP98P52948 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.36□□□□□ -1.39
NUP98P52948 BX842559.2-201ENST00000451418 605 ntBASIC6.36□□□□□ -1.39
NUP98P52948 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NUP98P52948 MIR3667-201ENST00000581025 74 ntBASIC6.36□□□□□ -1.39
NUP98P52948 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.36□□□□□ -1.39
NUP98P52948 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.36□□□□□ -1.39
NUP98P52948 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
NUP98P52948 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NUP98P52948 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NUP98P52948 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
NUP98P52948 AC004076.2-201ENST00000620532 3323 ntBASIC6.36□□□□□ -1.39
NUP98P52948 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.36□□□□□ -1.39
NUP98P52948 RPL34P27-201ENST00000428810 349 ntBASIC6.36□□□□□ -1.39
NUP98P52948 RPL7AP49-201ENST00000429522 581 ntBASIC6.36□□□□□ -1.39
NUP98P52948 AL591438.1-201ENST00000433508 581 ntBASIC6.36□□□□□ -1.39
NUP98P52948 IGHV5-78-201ENST00000450948 295 ntBASIC6.36□□□□□ -1.39
NUP98P52948 OR51K1P-201ENST00000510214 950 ntBASIC6.36□□□□□ -1.39
NUP98P52948 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.36□□□□□ -1.39
NUP98P52948 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.36□□□□□ -1.39
NUP98P52948 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.36□□□□□ -1.39
NUP98P52948 AL162431.4-201ENST00000604674 411 ntBASIC6.36□□□□□ -1.39
NUP98P52948 MIR6780A-201ENST00000615089 68 ntBASIC6.36□□□□□ -1.39
NUP98P52948 AC007786.3-201ENST00000615154 596 ntBASIC6.36□□□□□ -1.39
NUP98P52948 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.36□□□□□ -1.39
NUP98P52948 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NUP98P52948 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 ZNF652P1-201ENST00000442420 1309 ntBASIC6.35□□□□□ -1.39
NUP98P52948 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.35□□□□□ -1.39
NUP98P52948 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
NUP98P52948 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
NUP98P52948 AC022893.2-201ENST00000564832 3296 ntBASIC6.35□□□□□ -1.39
NUP98P52948 AC079741.1-201ENST00000321498 212 ntBASIC6.35□□□□□ -1.39
NUP98P52948 U3.30-201ENST00000391308 210 ntBASIC6.35□□□□□ -1.39
NUP98P52948 RAB28P1-201ENST00000411517 641 ntBASIC6.35□□□□□ -1.39
NUP98P52948 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.35□□□□□ -1.39
NUP98P52948 TXNP5-201ENST00000441043 315 ntBASIC6.35□□□□□ -1.39
NUP98P52948 AC010733.1-201ENST00000451515 401 ntBASIC6.35□□□□□ -1.39
NUP98P52948 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.35□□□□□ -1.39
NUP98P52948 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.35□□□□□ -1.39
NUP98P52948 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.35□□□□□ -1.39
NUP98P52948 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.35□□□□□ -1.39
NUP98P52948 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.35□□□□□ -1.39
NUP98P52948 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.35□□□□□ -1.39
NUP98P52948 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
NUP98P52948 AC025857.2-201ENST00000602711 238 ntBASIC6.35□□□□□ -1.39
NUP98P52948 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.35□□□□□ -1.39
NUP98P52948 AC000095.2-202ENST00000637415 154 ntBASIC6.35□□□□□ -1.39
NUP98P52948 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
NUP98P52948 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.35□□□□□ -1.39
NUP98P52948 AC010401.2-201ENST00000575137 4934 ntBASIC6.35□□□□□ -1.39
NUP98P52948 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NUP98P52948 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NUP98P52948 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms