Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 SNORA21-201ENST00000362423 132 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 RNU6-792P-201ENST00000363490 107 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 SNORA64.3-201ENST00000365647 134 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NKX2-1P43699 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 RBBP4P5-201ENST00000398583 1266 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AL133260.1-201ENST00000405720 405 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AL034374.1-201ENST00000406329 351 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.67□□□□□ -1.66
NKX2-1P43699 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 RNA5SP498-201ENST00000411342 120 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.67□□□□□ -1.66
NKX2-1P43699 THEM7P-201ENST00000419556 672 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-1P43699 UBE2D3P3-201ENST00000426992 425 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 HMGN2P27-201ENST00000427352 270 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AL512637.2-201ENST00000431287 1256 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 BX119904.1-201ENST00000432026 348 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 PTP4A1P3-201ENST00000433661 420 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AC064862.5-201ENST00000440618 334 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 RPS10P18-201ENST00000442662 495 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC234771.2-201ENST00000445718 597 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 FTLP8-201ENST00000446770 267 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 OR7E116P-201ENST00000448529 957 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 PSMC1P13-201ENST00000458195 985 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC004890.1-201ENST00000461005 181 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC018635.1-201ENST00000468292 1030 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AC138517.1-201ENST00000515724 568 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AC106785.3-201ENST00000564064 847 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AL589765.6-201ENST00000601909 549 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC133794.1-201ENST00000602731 914 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC073137.1-201ENST00000605636 634 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AL139099.4-201ENST00000614802 114 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 RFPL4AP6-201ENST00000616792 846 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC068880.4-201ENST00000623082 495 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 FRG1DP-201ENST00000635586 771 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 AL138820.1-201ENST00000617901 5305 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.67□□□□□ -1.66
NKX2-1P43699 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NKX2-1P43699 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 AC083899.2-201ENST00000423285 1376 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.66□□□□□ -1.66
NKX2-1P43699 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 AL034417.1-201ENST00000399343 800 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 PSMA6P1-201ENST00000400275 741 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 RNU2-17P-201ENST00000410290 190 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AC096921.1-201ENST00000411661 375 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 HYALP1-201ENST00000417674 1279 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.66□□□□□ -1.66
NKX2-1P43699 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NKX2-1P43699 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.66□□□□□ -1.66
NKX2-1P43699 PCBP2P1-201ENST00000437262 977 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
NKX2-1P43699 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 RPS7P10-201ENST00000464254 603 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 AC023245.1-201ENST00000468501 517 ntBASIC4.66□□□□□ -1.66
NKX2-1P43699 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.66□□□□□ -1.66
NKX2-1P43699 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms