Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFC4P35249 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 AC007996.1-201ENST00000620414 2821 ntBASIC6.67□□□□□ -1.34
RFC4P35249 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFC4P35249 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RFC4P35249 MIR1182-201ENST00000408363 97 ntBASIC6.67□□□□□ -1.34
RFC4P35249 SNORA11-201ENST00000408789 128 ntBASIC6.67□□□□□ -1.34
RFC4P35249 AC019050.1-201ENST00000418508 492 ntBASIC6.67□□□□□ -1.34
RFC4P35249 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.67□□□□□ -1.34
RFC4P35249 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.67□□□□□ -1.34
RFC4P35249 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.67□□□□□ -1.34
RFC4P35249 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.67□□□□□ -1.34
RFC4P35249 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.67□□□□□ -1.34
RFC4P35249 AC096741.1-201ENST00000472250 846 ntBASIC6.67□□□□□ -1.34
RFC4P35249 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.67□□□□□ -1.34
RFC4P35249 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RFC4P35249 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.67□□□□□ -1.34
RFC4P35249 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.67□□□□□ -1.34
RFC4P35249 AL512310.9-201ENST00000553311 948 ntBASIC6.67□□□□□ -1.34
RFC4P35249 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RFC4P35249 MIR4737-201ENST00000583979 81 ntBASIC6.67□□□□□ -1.34
RFC4P35249 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 AC135068.12-201ENST00000637370 931 ntBASIC6.67□□□□□ -1.34
RFC4P35249 AC104964.3-201ENST00000606115 2860 ntBASIC6.67□□□□□ -1.34
RFC4P35249 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RFC4P35249 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RFC4P35249 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.67□□□□□ -1.34
RFC4P35249 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFC4P35249 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.67□□□□□ -1.34
RFC4P35249 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFC4P35249 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
RFC4P35249 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RFC4P35249 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RFC4P35249 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RFC4P35249 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFC4P35249 NPM1P40-201ENST00000412758 733 ntBASIC6.66□□□□□ -1.34
RFC4P35249 USP24P1-201ENST00000433802 779 ntBASIC6.66□□□□□ -1.34
RFC4P35249 RHOT1P3-201ENST00000436571 331 ntBASIC6.66□□□□□ -1.34
RFC4P35249 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.66□□□□□ -1.34
RFC4P35249 AL390879.1-201ENST00000439143 386 ntBASIC6.66□□□□□ -1.34
RFC4P35249 RN7SL385P-201ENST00000468873 276 ntBASIC6.66□□□□□ -1.34
RFC4P35249 RN7SL188P-201ENST00000469842 285 ntBASIC6.66□□□□□ -1.34
RFC4P35249 AC140172.1-201ENST00000502928 141 ntBASIC6.66□□□□□ -1.34
RFC4P35249 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.66□□□□□ -1.34
RFC4P35249 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.66□□□□□ -1.34
RFC4P35249 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.66□□□□□ -1.34
RFC4P35249 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.66□□□□□ -1.34
RFC4P35249 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.66□□□□□ -1.34
RFC4P35249 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.66□□□□□ -1.34
RFC4P35249 AC209154.1-201ENST00000582156 337 ntBASIC6.66□□□□□ -1.34
RFC4P35249 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.66□□□□□ -1.34
RFC4P35249 AL627230.1-201ENST00000613077 211 ntBASIC6.66□□□□□ -1.34
RFC4P35249 AL591926.8-201ENST00000616876 211 ntBASIC6.66□□□□□ -1.34
RFC4P35249 AC012414.7-202ENST00000622705 1090 ntBASIC6.66□□□□□ -1.34
RFC4P35249 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
RFC4P35249 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
RFC4P35249 AL132656.3-201ENST00000606384 1595 ntBASIC6.65□□□□□ -1.34
RFC4P35249 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
RFC4P35249 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.65□□□□□ -1.34
RFC4P35249 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.65□□□□□ -1.34
RFC4P35249 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFC4P35249 AC068769.1-201ENST00000474767 2426 ntBASIC6.65□□□□□ -1.34
RFC4P35249 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RFC4P35249 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
RFC4P35249 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
RFC4P35249 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RFC4P35249 SNORA62-201ENST00000365493 153 ntBASIC6.65□□□□□ -1.34
RFC4P35249 RPS16P5-201ENST00000406501 404 ntBASIC6.65□□□□□ -1.34
RFC4P35249 RNU2-50P-201ENST00000410494 143 ntBASIC6.65□□□□□ -1.34
RFC4P35249 OR10T1P-201ENST00000424327 947 ntBASIC6.65□□□□□ -1.34
RFC4P35249 AC016712.1-201ENST00000431088 378 ntBASIC6.65□□□□□ -1.34
RFC4P35249 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.65□□□□□ -1.34
RFC4P35249 KNOP1P3-201ENST00000446933 426 ntBASIC6.65□□□□□ -1.34
RFC4P35249 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.65□□□□□ -1.34
RFC4P35249 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.65□□□□□ -1.34
RFC4P35249 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.65□□□□□ -1.34
RFC4P35249 AP000797.2-201ENST00000475768 606 ntBASIC6.65□□□□□ -1.34
RFC4P35249 RPS17P5-201ENST00000498293 408 ntBASIC6.65□□□□□ -1.34
RFC4P35249 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.65□□□□□ -1.34
RFC4P35249 HPRT1P1-201ENST00000509498 657 ntBASIC6.65□□□□□ -1.34
RFC4P35249 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.65□□□□□ -1.34
RFC4P35249 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.65□□□□□ -1.34
RFC4P35249 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.65□□□□□ -1.34
RFC4P35249 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.65□□□□□ -1.34
RFC4P35249 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFC4P35249 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.65□□□□□ -1.34
RFC4P35249 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFC4P35249 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.65□□□□□ -1.35
RFC4P35249 AL356317.1-201ENST00000396110 1436 ntBASIC6.65□□□□□ -1.35
RFC4P35249 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.65□□□□□ -1.35
RFC4P35249 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.65□□□□□ -1.35
RFC4P35249 AC099654.3-201ENST00000447087 1546 ntBASIC6.65□□□□□ -1.35
RFC4P35249 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
RFC4P35249 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RFC4P35249 CCAT2-201ENST00000630920 1752 ntBASIC6.64□□□□□ -1.35
RFC4P35249 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms