Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA3P32297 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.71□□□□□ -1.5
CHRNA3P32297 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CHRNA3P32297 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA3P32297 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHRNA3P32297 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 OR9K1P-201ENST00000326513 941 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AC005522.1-201ENST00000395416 346 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AL391361.1-201ENST00000405580 489 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AL445213.1-201ENST00000412589 747 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AC234781.4-201ENST00000419384 244 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.7□□□□□ -1.5
CHRNA3P32297 SNRPFP2-201ENST00000440710 251 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 CYCSP51-201ENST00000443545 318 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AL450023.1-201ENST00000450868 751 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA3P32297 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.7□□□□□ -1.5
CHRNA3P32297 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA3P32297 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA3P32297 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 IMPA1P1-201ENST00000510718 842 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CHRNA3P32297 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA3P32297 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA3P32297 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
CHRNA3P32297 AC040958.1-201ENST00000561102 201 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA3P32297 AC106730.2-201ENST00000566641 540 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AC015720.2-201ENST00000567709 334 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA3P32297 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA3P32297 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.7□□□□□ -1.5
CHRNA3P32297 AC079395.2-201ENST00000610982 737 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AP005212.4-201ENST00000614206 710 ntBASIC5.7□□□□□ -1.5
CHRNA3P32297 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CHRNA3P32297 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CHRNA3P32297 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.7□□□□□ -1.5
CHRNA3P32297 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CHRNA3P32297 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHRNA3P32297 MTND5P23-201ENST00000430812 1655 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 CASC19-248ENST00000641674 1356 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.69□□□□□ -1.5
CHRNA3P32297 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.69□□□□□ -1.5
CHRNA3P32297 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 AC098592.2-201ENST00000413158 265 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 COX5BP7-201ENST00000414780 274 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.69□□□□□ -1.5
CHRNA3P32297 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA3P32297 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.69□□□□□ -1.5
CHRNA3P32297 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA3P32297 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA3P32297 GAPDHP14-201ENST00000450472 937 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 ENPP7P11-201ENST00000505915 627 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.69□□□□□ -1.5
CHRNA3P32297 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 EIF3KP3-201ENST00000514461 639 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA3P32297 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CHRNA3P32297 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA3P32297 PPATP2-201ENST00000605635 508 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 AP000864.1-201ENST00000609424 650 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.69□□□□□ -1.5
CHRNA3P32297 CIR1P2-201ENST00000514821 1342 ntBASIC5.69□□□□□ -1.5
CHRNA3P32297 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA3P32297 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CHRNA3P32297 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNA3P32297 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNA3P32297 AC020633.1-201ENST00000468439 2247 ntBASIC5.68□□□□□ -1.5
CHRNA3P32297 LINC01963-201ENST00000562038 3148 ntBASIC5.68□□□□□ -1.5
CHRNA3P32297 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CHRNA3P32297 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNA3P32297 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNA3P32297 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms