Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CLIP1P30622 RN7SKP114-201ENST00000410327 279 ntBASIC8.24□□□□□ -1.09
CLIP1P30622 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.24□□□□□ -1.09
CLIP1P30622 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.24□□□□□ -1.09
CLIP1P30622 AL161722.2-201ENST00000434731 981 ntBASIC8.24□□□□□ -1.09
CLIP1P30622 IGLV2-34-201ENST00000490007 283 ntBASIC8.24□□□□□ -1.09
CLIP1P30622 AC105420.1-201ENST00000504389 582 ntBASIC8.24□□□□□ -1.09
CLIP1P30622 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.24□□□□□ -1.09
CLIP1P30622 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC8.24□□□□□ -1.09
CLIP1P30622 CLMN-206ENST00000556441 452 ntTSL 5 BASIC8.24□□□□□ -1.09
CLIP1P30622 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.24□□□□□ -1.09
CLIP1P30622 RN7SL290P-201ENST00000578661 300 ntBASIC8.24□□□□□ -1.09
CLIP1P30622 AC091905.4-201ENST00000623432 202 ntBASIC8.24□□□□□ -1.09
CLIP1P30622 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.24□□□□□ -1.09
CLIP1P30622 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP1P30622 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP1P30622 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC8.24□□□□□ -1.09
CLIP1P30622 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLIP1P30622 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP1P30622 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CLIP1P30622 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC8.23□□□□□ -1.09
CLIP1P30622 RNA5SP123-201ENST00000363244 119 ntBASIC8.23□□□□□ -1.09
CLIP1P30622 AL049745.1-201ENST00000433953 286 ntBASIC8.23□□□□□ -1.09
CLIP1P30622 RN7SL189P-201ENST00000468631 289 ntBASIC8.23□□□□□ -1.09
CLIP1P30622 AC020779.1-201ENST00000478757 796 ntBASIC8.23□□□□□ -1.09
CLIP1P30622 RPSAP51-201ENST00000497462 645 ntBASIC8.23□□□□□ -1.09
CLIP1P30622 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.23□□□□□ -1.09
CLIP1P30622 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC8.23□□□□□ -1.09
CLIP1P30622 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC8.23□□□□□ -1.09
CLIP1P30622 MIR4420-201ENST00000583944 77 ntBASIC8.23□□□□□ -1.09
CLIP1P30622 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP1P30622 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP1P30622 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC8.23□□□□□ -1.09
CLIP1P30622 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.23□□□□□ -1.09
CLIP1P30622 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP1P30622 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
CLIP1P30622 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP1P30622 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP1P30622 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CLIP1P30622 ERVFRD-3-201ENST00000578561 1617 ntBASIC8.23□□□□□ -1.09
CLIP1P30622 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLIP1P30622 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CLIP1P30622 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.23□□□□□ -1.09
CLIP1P30622 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP1P30622 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP1P30622 RNA5SP453-201ENST00000362503 119 ntBASIC8.22□□□□□ -1.09
CLIP1P30622 RN7SKP95-201ENST00000362860 303 ntBASIC8.22□□□□□ -1.09
CLIP1P30622 CYB5AP4-201ENST00000396692 399 ntBASIC8.22□□□□□ -1.09
CLIP1P30622 RPL26P29-201ENST00000415623 438 ntBASIC8.22□□□□□ -1.09
CLIP1P30622 NPM1P18-201ENST00000434232 732 ntBASIC8.22□□□□□ -1.09
CLIP1P30622 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8.22□□□□□ -1.09
CLIP1P30622 DUBR-205ENST00000495228 411 ntTSL 2 BASIC8.22□□□□□ -1.09
CLIP1P30622 RNA5SP43-201ENST00000516559 110 ntBASIC8.22□□□□□ -1.09
CLIP1P30622 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.22□□□□□ -1.09
CLIP1P30622 MEMO1P5-201ENST00000604810 406 ntBASIC8.22□□□□□ -1.09
CLIP1P30622 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP1P30622 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP1P30622 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP1P30622 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP1P30622 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC8.22□□□□□ -1.09
CLIP1P30622 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP1P30622 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP1P30622 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC8.22□□□□□ -1.09
CLIP1P30622 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP1P30622 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP1P30622 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLIP1P30622 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
CLIP1P30622 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.21□□□□□ -1.09
CLIP1P30622 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP1P30622 OR8V1P-201ENST00000395193 873 ntBASIC8.21□□□□□ -1.09
CLIP1P30622 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP1P30622 COX6B1P1-201ENST00000415962 213 ntBASIC8.21□□□□□ -1.09
CLIP1P30622 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC8.21□□□□□ -1.09
CLIP1P30622 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP1P30622 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.21□□□□□ -1.09
CLIP1P30622 HMGB1P32-201ENST00000425971 565 ntBASIC8.21□□□□□ -1.09
CLIP1P30622 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC8.21□□□□□ -1.09
CLIP1P30622 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP1P30622 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC8.21□□□□□ -1.09
CLIP1P30622 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP1P30622 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP1P30622 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
CLIP1P30622 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.21□□□□□ -1.09
CLIP1P30622 AC063949.1-201ENST00000552900 865 ntBASIC8.21□□□□□ -1.09
CLIP1P30622 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
CLIP1P30622 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
CLIP1P30622 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
CLIP1P30622 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC8.21□□□□□ -1.09
CLIP1P30622 BNIP3P35-201ENST00000604530 490 ntBASIC8.21□□□□□ -1.09
CLIP1P30622 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.21□□□□□ -1.09
CLIP1P30622 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP1P30622 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
CLIP1P30622 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CLIP1P30622 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLIP1P30622 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC8.21□□□□□ -1.1
CLIP1P30622 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CLIP1P30622 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLIP1P30622 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.21□□□□□ -1.1
CLIP1P30622 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CLIP1P30622 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms