Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.66□□□□□ -1.5
KRT3P12035 RPL7AP49-201ENST00000429522 581 ntBASIC5.66□□□□□ -1.5
KRT3P12035 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.66□□□□□ -1.5
KRT3P12035 AL591438.1-201ENST00000433508 581 ntBASIC5.66□□□□□ -1.5
KRT3P12035 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.66□□□□□ -1.5
KRT3P12035 AL035090.1-201ENST00000454835 332 ntBASIC5.66□□□□□ -1.5
KRT3P12035 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.66□□□□□ -1.5
KRT3P12035 RPL35AP19-201ENST00000469425 329 ntBASIC5.66□□□□□ -1.5
KRT3P12035 TRBV8-1-201ENST00000481590 279 ntBASIC5.66□□□□□ -1.5
KRT3P12035 EIF1P7-201ENST00000487533 337 ntBASIC5.66□□□□□ -1.5
KRT3P12035 RN7SL466P-201ENST00000497546 295 ntBASIC5.66□□□□□ -1.5
KRT3P12035 MORF4L2P1-201ENST00000503761 858 ntBASIC5.66□□□□□ -1.5
KRT3P12035 CDC42P3-201ENST00000518493 633 ntBASIC5.66□□□□□ -1.5
KRT3P12035 BLZF2P-201ENST00000553776 1130 ntBASIC5.66□□□□□ -1.5
KRT3P12035 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.66□□□□□ -1.5
KRT3P12035 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.66□□□□□ -1.5
KRT3P12035 AC009027.1-201ENST00000604510 479 ntBASIC5.66□□□□□ -1.5
KRT3P12035 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.66□□□□□ -1.5
KRT3P12035 AC026124.2-201ENST00000621847 656 ntBASIC5.66□□□□□ -1.5
KRT3P12035 AP003400.3-201ENST00000624904 346 ntBASIC5.66□□□□□ -1.5
KRT3P12035 SNORA17.5-201ENST00000630429 132 ntBASIC5.66□□□□□ -1.5
KRT3P12035 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
KRT3P12035 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRT3P12035 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRT3P12035 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.66□□□□□ -1.5
KRT3P12035 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 CDC27P2-201ENST00000425026 1922 ntBASIC5.66□□□□□ -1.5
KRT3P12035 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.66□□□□□ -1.5
KRT3P12035 CASC19-248ENST00000641674 1356 ntBASIC5.66□□□□□ -1.5
KRT3P12035 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
KRT3P12035 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRT3P12035 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRT3P12035 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRT3P12035 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
KRT3P12035 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
KRT3P12035 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRT3P12035 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRT3P12035 RNU1-19P-201ENST00000363306 165 ntBASIC5.65□□□□□ -1.5
KRT3P12035 RNA5SP187-201ENST00000384400 119 ntBASIC5.65□□□□□ -1.5
KRT3P12035 RNA5SP241-201ENST00000391326 114 ntBASIC5.65□□□□□ -1.5
KRT3P12035 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.65□□□□□ -1.5
KRT3P12035 AL133388.1-201ENST00000404509 287 ntBASIC5.65□□□□□ -1.5
KRT3P12035 AL589994.1-201ENST00000404962 340 ntBASIC5.65□□□□□ -1.5
KRT3P12035 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.65□□□□□ -1.5
KRT3P12035 AC234781.4-201ENST00000419384 244 ntBASIC5.65□□□□□ -1.5
KRT3P12035 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.65□□□□□ -1.5
KRT3P12035 NAP1L4P2-201ENST00000425958 899 ntBASIC5.65□□□□□ -1.5
KRT3P12035 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.65□□□□□ -1.5
KRT3P12035 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.65□□□□□ -1.5
KRT3P12035 AC100832.1-201ENST00000471945 383 ntBASIC5.65□□□□□ -1.5
KRT3P12035 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.65□□□□□ -1.5
KRT3P12035 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.65□□□□□ -1.5
KRT3P12035 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.65□□□□□ -1.5
KRT3P12035 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.65□□□□□ -1.5
KRT3P12035 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.65□□□□□ -1.5
KRT3P12035 AC010547.7-201ENST00000570323 333 ntBASIC5.65□□□□□ -1.5
KRT3P12035 AC020978.7-201ENST00000575953 1187 ntBASIC5.65□□□□□ -1.5
KRT3P12035 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.65□□□□□ -1.5
KRT3P12035 Z95327.3-201ENST00000610385 572 ntBASIC5.65□□□□□ -1.5
KRT3P12035 AC138965.3-201ENST00000623875 498 ntBASIC5.65□□□□□ -1.5
KRT3P12035 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRT3P12035 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRT3P12035 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
KRT3P12035 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.65□□□□□ -1.51
KRT3P12035 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRT3P12035 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
KRT3P12035 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRT3P12035 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRT3P12035 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRT3P12035 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRT3P12035 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRT3P12035 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.64□□□□□ -1.51
KRT3P12035 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRT3P12035 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
KRT3P12035 AP005432.1-201ENST00000580891 3485 ntBASIC5.64□□□□□ -1.51
KRT3P12035 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
KRT3P12035 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.64□□□□□ -1.51
KRT3P12035 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRT3P12035 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRT3P12035 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.64□□□□□ -1.51
KRT3P12035 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRT3P12035 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
KRT3P12035 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.64□□□□□ -1.51
KRT3P12035 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
KRT3P12035 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.64□□□□□ -1.51
KRT3P12035 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.64□□□□□ -1.51
KRT3P12035 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.64□□□□□ -1.51
KRT3P12035 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.64□□□□□ -1.51
KRT3P12035 RPL12P18-201ENST00000437175 325 ntBASIC5.64□□□□□ -1.51
KRT3P12035 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.64□□□□□ -1.51
KRT3P12035 GAPDHP25-201ENST00000447061 1001 ntBASIC5.64□□□□□ -1.51
KRT3P12035 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.64□□□□□ -1.51
KRT3P12035 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.64□□□□□ -1.51
KRT3P12035 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms