Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC068831.8-201ENST00000620171 435 ntBASIC8.9□□□□□ -0.98
TOP2AP11388 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC8.9□□□□□ -0.98
TOP2AP11388 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC8.9□□□□□ -0.98
TOP2AP11388 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
TOP2AP11388 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
TOP2AP11388 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.9□□□□□ -0.98
TOP2AP11388 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
TOP2AP11388 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.99
TOP2AP11388 CCDC162P-202ENST00000368966 6751 ntBASIC8.9□□□□□ -0.99
TOP2AP11388 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
TOP2AP11388 Z97832.1-201ENST00000402490 328 ntBASIC8.9□□□□□ -0.99
TOP2AP11388 P2RY10P2-201ENST00000416730 913 ntBASIC8.9□□□□□ -0.99
TOP2AP11388 DNAJC19P7-201ENST00000428811 344 ntBASIC8.9□□□□□ -0.99
TOP2AP11388 TXNP5-201ENST00000441043 315 ntBASIC8.9□□□□□ -0.99
TOP2AP11388 AC000111.2-201ENST00000448200 210 ntBASIC8.9□□□□□ -0.99
TOP2AP11388 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC8.9□□□□□ -0.99
TOP2AP11388 AL356390.1-201ENST00000455684 397 ntBASIC8.9□□□□□ -0.99
TOP2AP11388 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC8.9□□□□□ -0.99
TOP2AP11388 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC8.9□□□□□ -0.99
TOP2AP11388 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.9□□□□□ -0.99
TOP2AP11388 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
TOP2AP11388 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
TOP2AP11388 MIR6133-201ENST00000617057 108 ntBASIC8.9□□□□□ -0.99
TOP2AP11388 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
TOP2AP11388 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
TOP2AP11388 DHX40P1-201ENST00000588725 1412 ntBASIC8.89□□□□□ -0.99
TOP2AP11388 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TOP2AP11388 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.89□□□□□ -0.99
TOP2AP11388 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC8.89□□□□□ -0.99
TOP2AP11388 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.89□□□□□ -0.99
TOP2AP11388 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TOP2AP11388 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
TOP2AP11388 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TOP2AP11388 RPS3AP23-201ENST00000401762 784 ntBASIC8.89□□□□□ -0.99
TOP2AP11388 RPS16P5-201ENST00000406501 404 ntBASIC8.89□□□□□ -0.99
TOP2AP11388 HYALP1-201ENST00000417674 1279 ntBASIC8.89□□□□□ -0.99
TOP2AP11388 STRADBP1-201ENST00000478954 1281 ntBASIC8.89□□□□□ -0.99
TOP2AP11388 AC026979.1-201ENST00000492525 396 ntBASIC8.89□□□□□ -0.99
TOP2AP11388 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.89□□□□□ -0.99
TOP2AP11388 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.89□□□□□ -0.99
TOP2AP11388 AP001880.2-201ENST00000538233 448 ntBASIC8.89□□□□□ -0.99
TOP2AP11388 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC8.89□□□□□ -0.99
TOP2AP11388 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC8.89□□□□□ -0.99
TOP2AP11388 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC8.89□□□□□ -0.99
TOP2AP11388 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC8.89□□□□□ -0.99
TOP2AP11388 AC091932.2-201ENST00000623014 291 ntBASIC8.89□□□□□ -0.99
TOP2AP11388 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
TOP2AP11388 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.89□□□□□ -0.99
TOP2AP11388 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC8.88□□□□□ -0.99
TOP2AP11388 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC8.88□□□□□ -0.99
TOP2AP11388 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.88□□□□□ -0.99
TOP2AP11388 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TOP2AP11388 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TOP2AP11388 ELOCP19-201ENST00000411919 318 ntBASIC8.88□□□□□ -0.99
TOP2AP11388 COX6CP17-201ENST00000421389 185 ntBASIC8.88□□□□□ -0.99
TOP2AP11388 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.88□□□□□ -0.99
TOP2AP11388 AC099670.2-201ENST00000435130 321 ntBASIC8.88□□□□□ -0.99
TOP2AP11388 MED28P3-201ENST00000444288 531 ntBASIC8.88□□□□□ -0.99
TOP2AP11388 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC8.88□□□□□ -0.99
TOP2AP11388 AC010733.1-201ENST00000451515 401 ntBASIC8.88□□□□□ -0.99
TOP2AP11388 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TOP2AP11388 AC136624.4-201ENST00000573044 370 ntBASIC8.88□□□□□ -0.99
TOP2AP11388 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC8.88□□□□□ -0.99
TOP2AP11388 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC8.88□□□□□ -0.99
TOP2AP11388 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC8.88□□□□□ -0.99
TOP2AP11388 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC8.88□□□□□ -0.99
TOP2AP11388 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TOP2AP11388 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.87□□□□□ -0.99
TOP2AP11388 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
TOP2AP11388 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
TOP2AP11388 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TOP2AP11388 AL021331.1-201ENST00000402817 582 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 AL136116.2-201ENST00000404020 785 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 RPL7AP61-201ENST00000443410 636 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC8.87□□□□□ -0.99
TOP2AP11388 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.87□□□□□ -0.99
TOP2AP11388 RN7SL443P-201ENST00000464331 290 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 AC111000.3-201ENST00000508057 576 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC8.87□□□□□ -0.99
TOP2AP11388 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC8.87□□□□□ -0.99
TOP2AP11388 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC8.87□□□□□ -0.99
TOP2AP11388 AC012339.2-201ENST00000523996 453 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 OR8Q1P-201ENST00000526467 655 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOP2AP11388 AL110118.1-201ENST00000553543 400 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 AC019322.1-201ENST00000571869 389 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOP2AP11388 Z98755.1-201ENST00000407015 1384 ntBASIC8.87□□□□□ -0.99
TOP2AP11388 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.87□□□□□ -0.99
TOP2AP11388 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOP2AP11388 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOP2AP11388 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOP2AP11388 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
TOP2AP11388 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TOP2AP11388 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
TOP2AP11388 SNORA70F-201ENST00000384142 135 ntBASIC8.86□□□□□ -0.99
TOP2AP11388 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC8.86□□□□□ -0.99
TOP2AP11388 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TOP2AP11388 AC116562.1-201ENST00000485355 781 ntBASIC8.86□□□□□ -0.99
TOP2AP11388 RN7SL441P-201ENST00000492388 296 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms