Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 NIP7P2-201ENST00000485801 544 ntBASIC5.85□□□□□ -1.47
CCDC172P0C7W6 AL049874.2-201ENST00000492636 288 ntBASIC5.85□□□□□ -1.47
CCDC172P0C7W6 MTND6P2-201ENST00000512226 524 ntBASIC5.85□□□□□ -1.47
CCDC172P0C7W6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 RN7SL290P-201ENST00000578661 300 ntBASIC5.85□□□□□ -1.47
CCDC172P0C7W6 AP005403.1-201ENST00000579720 229 ntBASIC5.85□□□□□ -1.47
CCDC172P0C7W6 AC012616.1-201ENST00000600294 197 ntBASIC5.85□□□□□ -1.47
CCDC172P0C7W6 AC108738.1-201ENST00000603703 237 ntBASIC5.85□□□□□ -1.47
CCDC172P0C7W6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 AL513548.1-201ENST00000562904 1724 ntBASIC5.85□□□□□ -1.47
CCDC172P0C7W6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC172P0C7W6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 ADAM5-202ENST00000399789 1942 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 OR1L6-202ENST00000373684 1044 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 PCNPP4-201ENST00000414817 517 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 HSPD1P12-201ENST00000429127 1069 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC090018.1-201ENST00000434369 367 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC073909.1-201ENST00000447112 999 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AL672138.1-201ENST00000450604 1015 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AL645937.3-201ENST00000453647 936 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 IGBP1P4-201ENST00000503202 879 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 RN7SKP70-201ENST00000516655 271 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AL358913.1-201ENST00000554342 121 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AL049872.1-201ENST00000556323 322 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AL365181.4-201ENST00000609800 547 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AP001005.3-201ENST00000622049 129 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 AC006840.1-201ENST00000623069 542 ntBASIC5.84□□□□□ -1.47
CCDC172P0C7W6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
CCDC172P0C7W6 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.84□□□□□ -1.48
CCDC172P0C7W6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC000374.1-201ENST00000434698 1745 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 SSXP3-201ENST00000442971 1300 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 RNA5SP46-201ENST00000362370 120 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 RN7SKP153-201ENST00000365026 316 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC099535.1-201ENST00000408928 371 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC092754.1-201ENST00000472975 479 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 RPS12P31-201ENST00000491419 398 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 RPL37P23-201ENST00000492641 294 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC024940.3-201ENST00000538551 316 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 RN7SL356P-201ENST00000582228 248 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC244107.2-201ENST00000611773 76 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AC008115.3-201ENST00000614874 549 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 AP005431.1-201ENST00000618479 319 ntBASIC5.83□□□□□ -1.48
CCDC172P0C7W6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC172P0C7W6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms