Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
CHRNA1P02708 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
CHRNA1P02708 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
CHRNA1P02708 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CHRNA1P02708 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CHRNA1P02708 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CHRNA1P02708 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CHRNA1P02708 RN7SKP104-201ENST00000362605 328 ntBASIC5.84□□□□□ -1.47
CHRNA1P02708 MIR105-1-201ENST00000385222 81 ntBASIC5.84□□□□□ -1.47
CHRNA1P02708 HSPA8P15-201ENST00000401676 786 ntBASIC5.84□□□□□ -1.47
CHRNA1P02708 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA1P02708 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA1P02708 FABP7P2-201ENST00000429946 379 ntBASIC5.84□□□□□ -1.47
CHRNA1P02708 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA1P02708 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA1P02708 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA1P02708 RN7SL423P-201ENST00000486202 304 ntBASIC5.84□□□□□ -1.47
CHRNA1P02708 AC021106.1-201ENST00000509020 1058 ntBASIC5.84□□□□□ -1.47
CHRNA1P02708 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA1P02708 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 NPM1P5-201ENST00000557228 838 ntBASIC5.84□□□□□ -1.47
CHRNA1P02708 RN7SL356P-201ENST00000582228 248 ntBASIC5.84□□□□□ -1.47
CHRNA1P02708 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.84□□□□□ -1.47
CHRNA1P02708 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CHRNA1P02708 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.84□□□□□ -1.47
CHRNA1P02708 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHRNA1P02708 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.84□□□□□ -1.47
CHRNA1P02708 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CHRNA1P02708 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CHRNA1P02708 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.83□□□□□ -1.48
CHRNA1P02708 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.83□□□□□ -1.48
CHRNA1P02708 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 AC006206.1-201ENST00000544842 3387 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 AC114774.1-201ENST00000507410 1770 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 AL359955.1-201ENST00000455242 3275 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 KYNUP3-201ENST00000574386 1341 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
CHRNA1P02708 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.83□□□□□ -1.48
CHRNA1P02708 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CHRNA1P02708 RN7SKP115-201ENST00000363177 317 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 RNA5SP123-201ENST00000363244 119 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 RN7SKP103-201ENST00000363848 320 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CHRNA1P02708 CHMP1B2P-201ENST00000399581 597 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.83□□□□□ -1.48
CHRNA1P02708 RN7SKP17-201ENST00000411242 351 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.83□□□□□ -1.48
CHRNA1P02708 RPA2P2-201ENST00000419698 796 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.83□□□□□ -1.48
CHRNA1P02708 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CHRNA1P02708 RN7SL188P-201ENST00000469842 285 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 RPL7P40-201ENST00000481703 745 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.83□□□□□ -1.48
CHRNA1P02708 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.83□□□□□ -1.48
CHRNA1P02708 AC020937.1-201ENST00000519677 1013 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.83□□□□□ -1.48
CHRNA1P02708 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.83□□□□□ -1.48
CHRNA1P02708 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.83□□□□□ -1.48
CHRNA1P02708 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.83□□□□□ -1.48
CHRNA1P02708 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.83□□□□□ -1.48
CHRNA1P02708 MIR4480-201ENST00000582492 71 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.83□□□□□ -1.48
CHRNA1P02708 AC073342.3-201ENST00000624211 193 ntBASIC5.83□□□□□ -1.48
CHRNA1P02708 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.83□□□□□ -1.48
CHRNA1P02708 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CHRNA1P02708 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CHRNA1P02708 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHRNA1P02708 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CHRNA1P02708 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.82□□□□□ -1.48
CHRNA1P02708 DNM1P47-203ENST00000571780 12667 ntBASIC5.82□□□□□ -1.48
CHRNA1P02708 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHRNA1P02708 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHRNA1P02708 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CHRNA1P02708 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms