Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RNF40O75150 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.28□□□□□ -1.08
RNF40O75150 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
RNF40O75150 OR2A3P-202ENST00000641249 1776 ntBASIC8.27□□□□□ -1.08
RNF40O75150 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.27□□□□□ -1.08
RNF40O75150 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
RNF40O75150 AC108467.2-201ENST00000617640 1597 ntBASIC8.27□□□□□ -1.09
RNF40O75150 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
RNF40O75150 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC8.27□□□□□ -1.09
RNF40O75150 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 AC005614.1-201ENST00000598952 3653 ntBASIC8.27□□□□□ -1.09
RNF40O75150 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RNF40O75150 AC005294.1-201ENST00000355509 281 ntBASIC8.27□□□□□ -1.09
RNF40O75150 U8.3-201ENST00000363321 132 ntBASIC8.27□□□□□ -1.09
RNF40O75150 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 Y_RNA.384-201ENST00000383909 102 ntBASIC8.27□□□□□ -1.09
RNF40O75150 MIR181C-201ENST00000384881 110 ntBASIC8.27□□□□□ -1.09
RNF40O75150 NHP2P2-201ENST00000396362 460 ntBASIC8.27□□□□□ -1.09
RNF40O75150 COX6A1P3-201ENST00000404167 293 ntBASIC8.27□□□□□ -1.09
RNF40O75150 CCNYL3-201ENST00000407030 998 ntBASIC8.27□□□□□ -1.09
RNF40O75150 VN1R8P-201ENST00000407739 893 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 RBM22P7-201ENST00000421321 280 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 RANP1-206ENST00000455094 651 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 AL133480.2-201ENST00000456723 487 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC109454.1-201ENST00000471205 498 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC100843.1-201ENST00000475372 550 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 RPL7P39-201ENST00000481157 744 ntBASIC8.27□□□□□ -1.09
RNF40O75150 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 RPL7AP26-201ENST00000488538 813 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AL449212.1-201ENST00000499853 517 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.27□□□□□ -1.09
RNF40O75150 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 OR6M3P-201ENST00000531567 700 ntBASIC8.27□□□□□ -1.09
RNF40O75150 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC8.27□□□□□ -1.09
RNF40O75150 NELL2-211ENST00000548826 559 ntTSL 2 BASIC8.27□□□□□ -1.09
RNF40O75150 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 RPL21P5-201ENST00000554662 472 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC8.27□□□□□ -1.09
RNF40O75150 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.27□□□□□ -1.09
RNF40O75150 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 AC068714.1-201ENST00000559623 800 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.27□□□□□ -1.09
RNF40O75150 AL845331.3-202ENST00000562856 261 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC8.27□□□□□ -1.09
RNF40O75150 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 AC069499.2-201ENST00000610665 382 ntBASIC8.27□□□□□ -1.09
RNF40O75150 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 HMGB1P24-202ENST00000615653 685 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC037198.3-201ENST00000616754 526 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AP004607.9-201ENST00000618202 316 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC129778.1-202ENST00000623812 261 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 AL591379.1-207ENST00000635982 261 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.27□□□□□ -1.09
RNF40O75150 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC8.27□□□□□ -1.09
RNF40O75150 AC068860.1-201ENST00000623701 3736 ntBASIC8.27□□□□□ -1.09
RNF40O75150 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 AL591543.1-202ENST00000642095 4149 ntBASIC8.27□□□□□ -1.09
RNF40O75150 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 AC104162.1-201ENST00000430831 2382 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC020904.2-202ENST00000614660 1401 ntBASIC8.27□□□□□ -1.09
RNF40O75150 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 AC021242.1-201ENST00000507315 2035 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC009237.3-203ENST00000442128 3551 ntBASIC8.27□□□□□ -1.09
RNF40O75150 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
RNF40O75150 AC010886.1-201ENST00000437380 2869 ntBASIC8.27□□□□□ -1.09
RNF40O75150 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RNF40O75150 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 SSXP3-201ENST00000442971 1300 ntBASIC8.27□□□□□ -1.09
RNF40O75150 AC117409.1-201ENST00000470499 1310 ntBASIC8.27□□□□□ -1.09
RNF40O75150 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC8.27□□□□□ -1.09
RNF40O75150 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.27□□□□□ -1.09
RNF40O75150 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RNF40O75150 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.26□□□□□ -1.09
RNF40O75150 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
RNF40O75150 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms