Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 AC073488.9-201ENST00000631601 754 ntBASIC7.12□□□□□ -1.27
SOX1O00570 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.12□□□□□ -1.27
SOX1O00570 MFSD8-245ENST00000641743 948 ntBASIC7.12□□□□□ -1.27
SOX1O00570 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
SOX1O00570 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SOX1O00570 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.12□□□□□ -1.27
SOX1O00570 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
SOX1O00570 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.11□□□□□ -1.27
SOX1O00570 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 XRCC6P5-201ENST00000435236 1795 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AC009948.5-201ENST00000624360 4406 ntBASIC7.11□□□□□ -1.27
SOX1O00570 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SOX1O00570 TMSB4XP2-201ENST00000335179 210 ntBASIC7.11□□□□□ -1.27
SOX1O00570 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 RNU6-253P-201ENST00000384730 105 ntBASIC7.11□□□□□ -1.27
SOX1O00570 RPS27AP11-201ENST00000402798 447 ntBASIC7.11□□□□□ -1.27
SOX1O00570 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 AL929472.1-201ENST00000417484 429 ntBASIC7.11□□□□□ -1.27
SOX1O00570 RPS26P13-201ENST00000419030 330 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX1O00570 OR5AW1P-201ENST00000426334 1006 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX1O00570 TRIM60P18-201ENST00000441518 828 ntBASIC7.11□□□□□ -1.27
SOX1O00570 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 MTCO1P48-201ENST00000448024 1096 ntBASIC7.11□□□□□ -1.27
SOX1O00570 RPL36AP33-201ENST00000450395 310 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX1O00570 AC091685.2-201ENST00000454924 864 ntBASIC7.11□□□□□ -1.27
SOX1O00570 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 OR11I1P-201ENST00000486033 954 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.11□□□□□ -1.27
SOX1O00570 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX1O00570 H3F3AP3-201ENST00000497682 407 ntBASIC7.11□□□□□ -1.27
SOX1O00570 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.11□□□□□ -1.27
SOX1O00570 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX1O00570 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.11□□□□□ -1.27
SOX1O00570 AC087360.1-201ENST00000518788 616 ntBASIC7.11□□□□□ -1.27
SOX1O00570 IGKV3D-31-201ENST00000519131 281 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX1O00570 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 NPM1P5-201ENST00000557228 838 ntBASIC7.11□□□□□ -1.27
SOX1O00570 TPRKBP2-201ENST00000565969 475 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.11□□□□□ -1.27
SOX1O00570 AP001542.2-201ENST00000593141 364 ntBASIC7.11□□□□□ -1.27
SOX1O00570 EIF1P6-201ENST00000600054 334 ntBASIC7.11□□□□□ -1.27
SOX1O00570 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.11□□□□□ -1.27
SOX1O00570 AC006924.1-201ENST00000610750 559 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AC090517.2-201ENST00000614966 680 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AC007742.2-201ENST00000618226 398 ntBASIC7.11□□□□□ -1.27
SOX1O00570 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.11□□□□□ -1.27
SOX1O00570 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 AC073869.7-201ENST00000640874 297 ntBASIC7.11□□□□□ -1.27
SOX1O00570 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 AC083806.2-201ENST00000617795 2685 ntBASIC7.11□□□□□ -1.27
SOX1O00570 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms