Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SDCBPO00560 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.45□□□□□ -1.7
SDCBPO00560 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SDCBPO00560 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SDCBPO00560 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SDCBPO00560 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SDCBPO00560 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.44□□□□□ -1.7
SDCBPO00560 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 TMSB4XP4-201ENST00000323496 618 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AC017079.1-201ENST00000333650 415 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 RNA5SP223-201ENST00000365174 120 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 HSPA8P15-201ENST00000401676 786 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 MIR1282-201ENST00000408865 101 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.44□□□□□ -1.7
SDCBPO00560 AC002069.1-201ENST00000429649 1159 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.44□□□□□ -1.7
SDCBPO00560 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 AC046176.1-201ENST00000435260 1170 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.44□□□□□ -1.7
SDCBPO00560 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SDCBPO00560 AC105399.1-202ENST00000447303 205 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.44□□□□□ -1.7
SDCBPO00560 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.44□□□□□ -1.7
SDCBPO00560 CBX1P5-201ENST00000475330 559 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AC058823.1-201ENST00000485315 474 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 HMGB1P44-201ENST00000508597 572 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 ASNSP4-201ENST00000511103 447 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.44□□□□□ -1.7
SDCBPO00560 AC020937.1-201ENST00000519677 1013 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.44□□□□□ -1.7
SDCBPO00560 AP006245.2-201ENST00000522004 300 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.44□□□□□ -1.7
SDCBPO00560 MIR4472-2-201ENST00000582069 67 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.44□□□□□ -1.7
SDCBPO00560 FO393422.1-201ENST00000603908 708 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AC011626.1-201ENST00000604710 562 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 AC127024.6-201ENST00000621598 424 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AP001962.1-201ENST00000624114 559 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AL691477.1-201ENST00000624398 162 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 OR8A1-204ENST00000642111 1145 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 AC023421.1-201ENST00000590535 1785 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SDCBPO00560 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 AC139426.3-201ENST00000605648 2059 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 RNF19BPY-201ENST00000458209 1550 ntBASIC4.44□□□□□ -1.7
SDCBPO00560 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SDCBPO00560 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.44□□□□□ -1.7
SDCBPO00560 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.43□□□□□ -1.7
SDCBPO00560 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
SDCBPO00560 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.43□□□□□ -1.7
SDCBPO00560 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
SDCBPO00560 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SDCBPO00560 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
SDCBPO00560 RN7SKP16-201ENST00000410180 299 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.43□□□□□ -1.7
SDCBPO00560 MARK2P12-201ENST00000420129 585 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 AC104333.2-201ENST00000422630 192 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 SRSF1P1-201ENST00000424058 520 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.43□□□□□ -1.7
SDCBPO00560 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.43□□□□□ -1.7
SDCBPO00560 AL035090.1-201ENST00000454835 332 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.43□□□□□ -1.7
SDCBPO00560 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.43□□□□□ -1.7
SDCBPO00560 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.43□□□□□ -1.7
SDCBPO00560 AC074087.1-201ENST00000512059 724 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.43□□□□□ -1.7
SDCBPO00560 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.43□□□□□ -1.7
SDCBPO00560 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SDCBPO00560 AC135626.1-201ENST00000556983 435 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.43□□□□□ -1.7
SDCBPO00560 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.43□□□□□ -1.7
SDCBPO00560 MIR1273E-201ENST00000581165 102 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 RN7SL787P-201ENST00000613000 284 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 MIR6861-201ENST00000618657 64 ntBASIC4.43□□□□□ -1.7
SDCBPO00560 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms