Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 RNA5SP477-201ENST00000362639 119 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 RNU6-1263P-201ENST00000384601 106 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 RMRPP5-201ENST00000411156 267 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AL445213.1-201ENST00000412589 747 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AC104333.2-201ENST00000422630 192 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC188H7C350 OR6D1P-201ENST00000436165 939 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AL138787.1-202ENST00000437804 898 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC188H7C350 GTF3AP5-201ENST00000442645 697 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC188H7C350 DNAJB5P1-201ENST00000454004 806 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 RPS23P6-201ENST00000466136 431 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AC092754.1-201ENST00000472975 479 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 CBX1P5-201ENST00000475330 559 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AC098818.1-201ENST00000478593 252 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AC023424.1-201ENST00000496058 459 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC188H7C350 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC188H7C350 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC188H7C350 AP003033.2-201ENST00000528901 805 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC188H7C350 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC188H7C350 CYCSP38-201ENST00000559840 322 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC188H7C350 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 AC012213.4-201ENST00000606457 354 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 AC005828.7-201ENST00000607331 556 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC188H7C350 AC105105.5-201ENST00000622635 1294 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CCDC188H7C350 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 AC004817.4-201ENST00000602396 3625 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 THAP12P5-201ENST00000405864 2275 ntBASIC5.6□□□□□ -1.51
CCDC188H7C350 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC188H7C350 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AL356317.1-201ENST00000396110 1436 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 CASC19-248ENST00000641674 1356 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC188H7C350 PROS2P-201ENST00000474651 1951 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 TMSB4XP2-201ENST00000335179 210 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC188H7C350 GAPDHP42-201ENST00000406848 981 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 BX323845.3-201ENST00000428215 527 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC188H7C350 Z84478.1-201ENST00000438230 1219 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC188H7C350 VDAC2P4-201ENST00000452925 711 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AL035090.1-201ENST00000454835 332 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC188H7C350 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC188H7C350 MTND6P2-201ENST00000512226 524 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 SNORA70.20-201ENST00000516848 126 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC188H7C350 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC008147.3-201ENST00000548666 354 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 AC079905.1-201ENST00000549280 475 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 DUX4L52-201ENST00000549363 777 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC188H7C350 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC188H7C350 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC188H7C350 LINC00556-201ENST00000569603 412 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC245128.3-201ENST00000594721 748 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC188H7C350 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC188H7C350 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC188H7C350 AC087565.3-203ENST00000641018 837 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 AC073869.10-201ENST00000642016 354 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC188H7C350 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC188H7C350 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CCDC188H7C350 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC188H7C350 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms