Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC007996.1-201ENST00000620414 2821 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 GAPDHP24-201ENST00000328713 983 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 RNA5SP30-201ENST00000365552 115 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AL034374.1-201ENST00000406329 351 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 RNA5SP498-201ENST00000411342 120 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AL590806.1-201ENST00000415818 853 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AK4P4-201ENST00000419465 646 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC012497.1-201ENST00000429392 575 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 RPL17P35-201ENST00000432217 549 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 HMGB3P24-201ENST00000433260 622 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 MTND2P40-201ENST00000436718 841 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 NANOGP9-201ENST00000439890 892 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 LINC02210-201ENST00000444561 288 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AL596266.1-201ENST00000448132 400 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 NXT1P1-201ENST00000458481 316 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 MRE11P1-201ENST00000464884 2127 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC116562.1-201ENST00000485355 781 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 RPL37P23-201ENST00000492641 294 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 DUTP7-201ENST00000507982 486 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC103833.1-201ENST00000517442 172 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 TRIM77BP-201ENST00000524985 1119 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC122688.1-201ENST00000541494 223 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AL136520.1-202ENST00000555494 763 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 DPPA2P4-201ENST00000563717 878 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 MIR3908-201ENST00000579798 126 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 FO681491.1-202ENST00000623392 737 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC145207.9-201ENST00000623802 325 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC129778.1-202ENST00000623812 261 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AL591379.1-207ENST00000635982 261 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC006206.1-201ENST00000544842 3387 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC027228.2-201ENST00000567141 2154 ntBASIC4.53□□□□□ -1.68
SRRM4A7MD48 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.53□□□□□ -1.69
SRRM4A7MD48 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
SRRM4A7MD48 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SRRM4A7MD48 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 SNORA64.1-201ENST00000362600 132 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 RNA5SP433-201ENST00000364491 114 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 RN7SKP275-201ENST00000364626 301 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 OR6K3-202ENST00000368146 996 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 SNORA5.1-201ENST00000384275 131 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 OR7E101P-201ENST00000400428 513 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms