Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAV27A0A087WT01 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AC100778.3-201ENST00000580060 1750 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 RNA5SP90-201ENST00000364801 99 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AL031985.1-201ENST00000392713 418 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AL391422.1-201ENST00000402155 436 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AL390774.1-201ENST00000411924 246 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 FAM96AP1-201ENST00000430879 482 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 CYCSP12-201ENST00000437729 300 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AL138899.2-201ENST00000439139 499 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 RN7SL466P-201ENST00000497546 295 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AC097173.1-201ENST00000505862 819 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AC026782.2-201ENST00000510845 636 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 LSM1P2-201ENST00000604911 322 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 AC005840.5-201ENST00000619166 599 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TRAV27A0A087WT01 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 U3.32-201ENST00000408116 212 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC211486.3-201ENST00000412694 621 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC017078.1-201ENST00000416146 368 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 VN1R3-201ENST00000418822 919 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 RPS29P10-201ENST00000439197 166 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC020779.1-201ENST00000478757 796 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC012123.2-201ENST00000485809 248 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 TMEM97P2-201ENST00000517841 403 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC012400.1-201ENST00000518452 381 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 OOSP1P2-201ENST00000579644 351 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC015982.1-201ENST00000608113 465 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC108359.1-201ENST00000616451 1211 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC126175.1-201ENST00000617041 758 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 SAMMSON-227ENST00000642114 1199 ntBASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRAV27A0A087WT01 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AC005261.2-201ENST00000593427 4258 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AP005432.1-201ENST00000580891 3485 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 U3.3-201ENST00000362986 216 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 MIR1282-201ENST00000408865 101 ntBASIC4.66□□□□□ -1.66
TRAV27A0A087WT01 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms