Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 RPL12P12-201ENST00000424633 501 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 TRIM60P16-201ENST00000444048 694 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 HSFY3P-201ENST00000444242 1191 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AL606517.1-201ENST00000446914 387 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 CFL1P4-201ENST00000451536 498 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AGGF1P7-201ENST00000562369 913 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 MIR4789-201ENST00000577469 82 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AL645933.2-201ENST00000606743 1207 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AC093673.2-201ENST00000609674 331 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 U1.25-201ENST00000614085 162 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 PSG10P-201ENST00000501199 1500 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 AC016583.1-201ENST00000624221 2431 ntBASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL4A3BPQ9Y5P4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 SEC63P2-201ENST00000503863 1939 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 HSPA8P17-201ENST00000427029 1382 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 RNU5E-10P-201ENST00000363506 118 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 SUGT1P2-201ENST00000379452 992 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 RNU6-298P-201ENST00000390888 96 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 MTATP6P31-201ENST00000406985 692 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 DPPA2P2-201ENST00000418220 897 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC114973.1-201ENST00000429057 632 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 H3F3BP1-201ENST00000440551 403 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 RPL31P44-201ENST00000447680 377 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 RPL23AP40-201ENST00000487630 390 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 ASNSP4-201ENST00000511103 447 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC021451.1-201ENST00000523498 1129 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 OR7E13P-201ENST00000526052 910 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 NANOGNBP2-201ENST00000544753 553 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC027104.1-201ENST00000563702 681 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AP005119.1-201ENST00000580956 292 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 VN1R87P-201ENST00000596706 487 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC069431.2-201ENST00000604149 1099 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC096586.1-201ENST00000610267 561 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AL096712.1-201ENST00000614561 159 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC096861.1-201ENST00000616652 240 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC084824.4-201ENST00000620106 731 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC129778.1-202ENST00000623812 261 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AP001962.1-201ENST00000624114 559 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AL591379.1-207ENST00000635982 261 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 AC099654.6-201ENST00000636487 512 ntBASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A3BPQ9Y5P4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.73□□□□□ -1.33
COL4A3BPQ9Y5P4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms