Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
RAI2Q9Y5P3 AC092070.2-203ENST00000598377 3644 ntBASIC5.72□□□□□ -1.49
RAI2Q9Y5P3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAI2Q9Y5P3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
RAI2Q9Y5P3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 RNA5SP46-201ENST00000362370 120 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 RNU6-670P-201ENST00000364312 104 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AC096921.1-201ENST00000411661 375 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AL807761.1-201ENST00000417622 171 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 MTND2P30-201ENST00000456663 382 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AC015908.1-201ENST00000478739 476 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AC093890.1-201ENST00000502554 540 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AC138866.2-201ENST00000508650 584 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 IGLV3-24-201ENST00000517477 197 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AC137627.1-201ENST00000545761 289 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AL671309.1-201ENST00000603750 544 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 OR7M1P-201ENST00000608946 533 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AC006453.5-201ENST00000636451 619 ntBASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAI2Q9Y5P3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 RNA5SP507-201ENST00000363603 121 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 U3.10-201ENST00000364459 214 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 RNA5SP131-201ENST00000365452 119 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 RNU6-925P-201ENST00000384629 104 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AL355143.1-201ENST00000407101 841 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC113412.1-201ENST00000425840 504 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 Z84478.1-201ENST00000438230 1219 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 CYCSP51-201ENST00000443545 318 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 GYG1P1-201ENST00000460864 698 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 OR2AO1P-201ENST00000476497 403 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 OR9N1P-201ENST00000491296 333 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 RN7SKP157-201ENST00000516174 282 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC090330.1-201ENST00000588646 764 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 IMMP1LP3-201ENST00000604197 224 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC007204.2-201ENST00000615022 616 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC026367.3-201ENST00000619032 590 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 AC015799.1-201ENST00000622996 3122 ntBASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAI2Q9Y5P3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms