Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SUMO2P15-201ENST00000604285 278 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AP000864.1-201ENST00000609424 650 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC010608.3-201ENST00000625048 527 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC007842.1-201ENST00000597336 2039 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AOX3P-204ENST00000491025 2107 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 AC140134.1-201ENST00000511830 3544 ntBASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX2IPQ9Y2D8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
SSX2IPQ9Y2D8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC239868.2-201ENST00000564237 4527 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 OR4K17-201ENST00000315543 1032 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 RNU6-40P-201ENST00000384254 107 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 RNU6-584P-201ENST00000410350 95 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 NPM1P26-201ENST00000426339 738 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 ZNF965P-201ENST00000432501 817 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 MTCYBP15-201ENST00000433123 1127 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 Z80107.1-201ENST00000436830 412 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AL513321.1-201ENST00000441175 761 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 CABYRP1-201ENST00000465493 1045 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC093663.2-201ENST00000484625 313 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 OR7E157P-201ENST00000494376 911 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 BX510359.5-201ENST00000515651 304 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 SNORA70.11-201ENST00000515987 138 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 RNU6-615P-201ENST00000516065 106 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 SNORA70.13-201ENST00000516116 138 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 SNORA76.2-201ENST00000517095 137 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 RNU6-889P-201ENST00000517189 103 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 SNORA43.3-201ENST00000517240 103 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AL049872.1-201ENST00000556323 322 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 OR4H6P-201ENST00000563771 921 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 CD24P2-201ENST00000565486 219 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 MIMT1-201ENST00000597105 1050 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 RNA5SP439-201ENST00000617595 124 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AL445670.1-201ENST00000618889 801 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 AL138820.1-201ENST00000617901 5305 ntBASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX2IPQ9Y2D8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 GAPDHP24-201ENST00000328713 983 ntBASIC6.26□□□□□ -1.41
SSX2IPQ9Y2D8 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms