Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AL133320.1-201ENST00000621423 2352 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 Y_RNA.202-201ENST00000364083 110 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC092634.1-201ENST00000366505 199 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 CDC42P6-201ENST00000421246 576 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 RPL7AP51-201ENST00000422016 760 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC134879.1-201ENST00000426062 394 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AL731892.1-201ENST00000437364 1192 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC079776.3-201ENST00000450665 370 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 SNRPFP4-201ENST00000456366 242 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AL162395.1-201ENST00000457882 422 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 RPS4XP12-201ENST00000461747 709 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC021660.1-201ENST00000465006 554 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 PAICSP4-201ENST00000517543 1253 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AP005597.2-201ENST00000526238 341 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 OR6M3P-201ENST00000531567 700 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 OR4A1P-201ENST00000532342 920 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC009027.1-201ENST00000604510 479 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC113361.1-201ENST00000606683 543 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC103710.1-201ENST00000610003 901 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC090971.5-201ENST00000621102 293 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AC087821.2-201ENST00000637086 450 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 AP003471.1-202ENST00000319051 1988 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 LINC02035-201ENST00000610128 5476 ntBASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
HPS5Q9UPZ3 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC104447.1-201ENST00000624214 2124 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 MAPK10-333ENST00000641607 2481 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC011155.1-201ENST00000316512 456 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 RN7SKP250-201ENST00000363924 321 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AL139805.1-201ENST00000407837 289 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC009413.1-201ENST00000414823 399 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 FTOP1-201ENST00000419363 861 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 MYO5BP3-201ENST00000431872 1279 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC099670.1-201ENST00000455141 783 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC022336.1-201ENST00000475510 337 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC008040.4-201ENST00000494834 768 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 HMGB1P29-201ENST00000505659 499 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 MTND6P2-201ENST00000512226 524 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AP002748.2-201ENST00000528671 348 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AL512310.1-201ENST00000548639 172 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 BNIP3P23-201ENST00000599655 511 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC092960.1-201ENST00000604762 351 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AC005084.1-201ENST00000605160 304 ntBASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC8.68□□□□□ -1.02
HPS5Q9UPZ3 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms