Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 AC095055.1-201ENST00000603472 1113 ntBASIC5.56□□□□□ -1.52
CISHQ9NSE2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CISHQ9NSE2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CISHQ9NSE2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CISHQ9NSE2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 AL138820.1-201ENST00000617901 5305 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 CIR1P2-201ENST00000514821 1342 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 SNORA17.1-201ENST00000362945 126 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 RNA5SP223-201ENST00000365174 120 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 MIR223-201ENST00000385204 110 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 MIR323B-201ENST00000385269 82 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 RPL7P58-201ENST00000402913 758 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 RPL12P9-201ENST00000412942 488 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 AL136231.1-201ENST00000429407 730 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 CNOT7P2-201ENST00000441051 832 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 OR52E3P-201ENST00000452083 936 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC108751.3-201ENST00000461814 1020 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 HIGD1AP14-201ENST00000507617 282 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC090022.1-201ENST00000546569 311 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC022884.2-201ENST00000578535 580 ntBASIC5.55□□□□□ -1.52
CISHQ9NSE2 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CISHQ9NSE2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.55□□□□□ -1.52
CISHQ9NSE2 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CISHQ9NSE2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 PANDAR-201ENST00000629595 1506 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CISHQ9NSE2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CISHQ9NSE2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CISHQ9NSE2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CISHQ9NSE2 RNU6-316P-201ENST00000391027 107 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CISHQ9NSE2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 AC009506.2-201ENST00000420635 840 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 BX842559.2-201ENST00000451418 605 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 RN7SL222P-201ENST00000476452 299 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 OR11J2P-201ENST00000555298 907 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 AC027216.1-201ENST00000577726 685 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 AC091932.2-201ENST00000623014 291 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.54□□□□□ -1.52
CISHQ9NSE2 AL450345.1-202ENST00000605741 3881 ntBASIC5.54□□□□□ -1.52
CISHQ9NSE2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CISHQ9NSE2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CISHQ9NSE2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AL590763.1-201ENST00000398297 1545 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms